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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LpR2-PB
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.78
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPICRILGC SFLLLIAGLV PHHASRVVGL ESTCSQEQFR CGNGKCIPRR WVCDRENDCA  60
   61 DGSDESTSQC RGLCSSLMFM CKNGEQCIHR EFMCDGDQDC RDGSDELECG NRTCRSDEFT 120
  121 CGNGRCIQNR FKCDDDDDCG DGSDEKNCGE KAKCGSNFFA CKSGPCIPNQ WVCDGDSDCR 180
  181 NGEDEMQNCT VSLLNFCQAG EFQCSDRITC LHKSWVCDGE ADCPDGEDES QSNCLKVSCR 240
  241 PDQFQCNDQS CIAGHLTCNG KRDCADGSDE IMCDISATPR TCNATTEFDC GGGLCIPNAK 300
  301 VCNRRKDCPN GEDEPAGKCG INECSSKNGG CMHQCVNLEV GYRCECHDGY KLGADQHTCV 360
  361 DIDECETPGI CSQVCVNEIG AFKCECEAGY MRLLKNHTRC KASEGHASLL LARRHDIRKI 420
  421 ALDRPEMTSI VNSTKAATAL DFVFRTGMIF WSDVATQSIY KAPIDEGNDR TVVLTKSSVT 480
  481 SDGLAVDWIY NHVYFTDTHK CTIELTNFEG SMGKVLVKDS LDIPRSIALD PIEGWMYWSD 540
  541 WGASPRIERA GMDGTHRTAI ITYDVKWPNG ITLDLVQKRL YWVDGKLNTI SSSNYDGSQR 600
  601 HQVLYSGEYL RHPFSITTFE DYVYWTDWDK QAVFKANKFN GMDVEPVTAT HMLEHPMVVH 660
  661 VYHPYRQPDG VNHCQSVNGH CSHLCLPAPR INERSPRISC ACPTGLKLMP DGLMCVEDLE 720
  721 TKTGNNRTDT SNQVHKSDAE SENDYVEIAL HVIASLAGTA LVASVIYVVY RRCTRAVNSM 780
  781 NFENPVYHKT TEDHFSLEKN GTPHIYAAAN DEEAVNPLFK SGTECV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle