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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: OstStt3-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRTPKMLNS KVAGYSSLIT FAILLIAWLA GFSSRLFAVI RFESIIHEFD PWFNYRATAY  60
   61 MVQNGWYNFL NWFDERAWYP LGRIVGGTVY PGLMITSGGI HWLLHVLNIP VHIRDICVFL 120
  121 APIFSGLTSI STYLLTKELW SAGAGLFAAS FIAIVPGYIS RSVAGSYDNE GIAIFALQFT 180
  181 YFLWVRSVKT GSVFWSAAAA LSYFYMVSAW GGYVFIINLI PLHVFVLLIM GRYSPRLLTS 240
  241 YSTFYILGLL FSMQIPFVGF QPIRTSEHMA ALGVFVLLMA VATLRHLQSV LSRNEFRKLF 300
  301 IVGGLLVGVG VFVAVVVLTM LGVVAPWSGR FYSLWDTGYA KIHIPIIASV SEHQPTTWFS 360
  361 FFFDLHILVC AFPVGVWYCI KQINDERVFV VLYAISAVYF AGVMVRLMLT LTPVVCMLAG 420
  421 VAFSGLLDVF LQEDSSKRMG TAISAATEVD EAEDSIEKKT LYDKAGKLKH RTKHDAQQDT 480
  481 GVSSNLKSIV ILAVLMLLMM FAVHCTWVTS NAYSSPSIVL AFHNSQDGSR NILDDFREAY 540
  541 YWLSQNTADD ARVMSWWDYG YQIAGMANRT TLVDNNTWNN SHIALVGKAM SSTEEKSYEI 600
  601 MTSLDVDYVL VIFGGVIGYS GDDINKFLWM VRIAEGEHPK DIKESDYFTD RGEFRVDAEG 660
  661 APALLNCLMY KLSYYRFGEL KLDYRGPSGY DRTRNAVIGN KDFDLTYLEE AYTTEHWLVR 720
  721 IYRVKKPHEF NRPSLKTKER TIPPANFISR KNSKRRKGYI RNRPVVVKGK RTLK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle