YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG6995-PC
Protein type:	Globular with Signal Peptide
Type Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELAEKSTAA PGGATSSTAS SAAGSKSGSG SSAGNGTGAN SNNKQATLSR NLWVSGLSTL  60
   61 TRASDLKAIF SKFGKVIGAK VVTNTRTPGT RCYGYVTMSS SADASRCIEN LHRTELHGRI 120
  121 ISVERTKNEI GGSLNSKEGK GKAPGDAGNK KKEDDSGKKS GSGKGSSSNS GDDKKGGDGN 180
  181 GDSKSVGGDL KRDGKESNRA RSRRNDDRGK SLASQDRPRH DRERSAKGSQ DHRSGRNPRD 240
  241 VDREIQQRQR ERERRQREML SYQKIREERE RQRLRERERE LREEERRRRE ARERQRIEEE 300
  301 RLQEERRKLA VERERLEREK AELLRMERER QKLEREKIEL ERLELKRQQM KYAKKKTKTD 360
  361 RNALHSCQRR GDNTDIPIYL FYTLSESICP CD

Type	Start	End	Confidence
Signal Peptide	1	22	0.82
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	392	0.99