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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0297167, CG5...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSSAKPTRK NPRQHANIIS QLIFAWAIPL LYRGSRRGLN TDDLTQCLKE DRSEQLGDRL  60
   61 EDQWFKELER SHRKKQKPHL RNALFRCFLG PTIINGLICF IYIVIKTLIP AVLAQLLIQF 120
  121 QKTPVAQLRN IDVNDISISD SLNRTARAIP NYVLSQAVAN SSGSPGDALF PKSLDKAGPL 180
  181 EPIQPPVEEV DHNATAVRSI LDQTVEHMWN DMNSLGAVLV LSTLFCCFLL HHVDLRQRLM 240
  241 GARMRIACCS LIYRKTLRLS MKTAGQTPAG YLINLLSNDV NRLDYGFIFM HWIWIMPLQA 300
  301 MLTCYLIWLN IGIPAIVGVV GLLLKTVPVQ TALSKVTSVL RMRIAERTDA RVGIMNELVQ 360
  361 GIQVIKMYAW EKPFQAVVAE ARRSEIKQIR YASYLRGFYL STMVFTERST LYITLAAAAL 420
  421 MGQTITADFV FSAASYYNIL QLVAAIWYPL AVSFGAEALV SLRRIQDFLM LEGREERTQG 480
  481 LTHKRDQEGG DSRAVTIKDI NASWDIEKPQ KTLQSINLQI EKGQLCAVIG PVGAGKSSIL 540
  541 QLLLGELPVI DGGVFIQGDL SYAAQEPWLF TGSVRNNILF GEEFDRKRYQ EVTRCCALST 600
  601 DFQQLPNGDK TLVGERGASL SGGQRARISL ARAVYKPAQI YLMDDPLSAV DAHVGRHLFD 660
  661 EVIGPRGRLA QLKATRILVT HQVHFLSEAD VIVIVDQGRI LRQGTYQELI NSDLDFARLL 720
  721 ERPKEEEEGE NSRNQTSPLS VNSLESDDED IPFIDGVKDG YQQLRKQSSS VHGSKSLDST 780
  781 QLDDNVDEDD LAEAQASGGI SPRVWYEYFH AGSTLLSFSF MVFVMVMSQV VCSSSDFFAN 840
  841 IWTQQEHQRS QGEATFSTFE CMYIYGALII AVVIMTTFRG FLFFKICMHA SKVLHDRMFA 900
  901 CILHATMRFF DTTPSGRILN RFSKDMGAID ELLPRAMMDF IQIALVMFGI LIVIGILNPV 960
  961 LVAAMLVVAV VDVLILKLYL RPSQDLKRLE GICRSPVFSH LSASLTGLAI IRSRQLQDVV1020
 1021 AKEFDLLQDV HSSVWQLTMA VNTTLGLWLD CVSCIFLTSV TFSFIISSET TYSGNVGLAI1080
 1081 AQAMILTGMV QYGVRQVAES LQQMTSVERV LQYTELEQEP ALGEKTPPQQ WPTRGQVEFR1140
 1141 NMSCRYDPNG SPVLRNLNLT IEAGWKVGIV GRTGAGKSSL IGALFRLAHI EGEIFIDGIE1200
 1201 TGTISLEILR TRISIIPQDP VLFSATIRYN LDPFERYTDA ELWSALEDVE LRKAIPGLDY1260
 1261 MVTERGGNFS VGQRQLLCLA RAILRNNKVL VLDEATANVD PQTDALIQRT IRIKFKQCTV1320
 1321 LTVAHRLHTV MDSDRIIVMD AGVAVEFDVP YLLLKKSQGH LRQMVEATGG ESEALKKTAS1380
 1381 DSHKRMQRER DERDRDQDES QE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle