YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: KrT95D-PA, KrT95D-PB
Protein type: Transmembrane
Type Confidence: 0.68
Topology Confidence: 0.40
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMVDKSSKL VDKFAVISGT GGSGPGGGPL NLQSGGGGGG SGGGGGVSGS GGISGTAGLS  60
   61 AGAGMTTGQK PVPMKLFAAW EVDRTPPNCI PRLCSLTITR LSILTPLPGD TTSLSLAVKM 120
  121 QSSKRTLRSH EIPINGLALT SSASLQGNSP MSVAGGVGGG GVGTPGSVGT GGGLGVAVPL 180
  181 TETELDLHFS LQYPHFIKRD GNRLVILLQR RKKYKSRTIL GYKTLAEGII RMDAVLQKSM 240
  241 DMIIELTASG KNGRPGTVVA CLRAERVSSI PVDHDNKNNN SVLLADRVAE YSDEDEEAEF 300
  301 SSGEFNDEAN ELGLIRGYDP KDPRDYNHPA KHDMRKYRNK LQRSGIEDCA LVGHHPGSIQ 360
  361 HHHPGVVVDS DSEFEMKDKS SSRAKFSRTI SLQQRNFKQK IVALLKRFKV SEELEGESGH 420
  421 RGTAALRGER DLDALFQELE SLSCCEGDDS GPDMDSISVG STPKPSLRPF FTNSRIMLHD 480
  481 NITGNGGDLS QLVGGGLGPG TGTAGNSERR SSDKSDQLTN SSYNLENNKN QKCIHLTNNN 540
  541 NSATTPDRGG NDSSGNEGNA GYTDGQNSDP QNSPPRDKDY LRLQQMQQQQ LTPVSSVAAS 600
  601 MGSGSVITPA QTEKRSRLFR TSSNTPANAG SGGNSVSAIS ASGGGKRKHT LSLSAEPRSV 660
  661 LEACLSPTNV EPRKLLLDQL SRVFAGEDSA IPEVVTIISP PEALGGSALL AKLVTLFANS 720
  721 FKPAFVPQNT AEVKAVLQAL MAKIQKYCNS NAKPPHTVKV LLIGGDWLQG ATLRHYVELM 780
  781 GVRPPDWLNH LRFYLVPVGG SCGSVARHLS QMDQAYAVMF GSDNWTQLCE RAAATAAAVS 840
  841 AVTTVNATAL TTNLADAAGV AKSDIAELVQ RIQRYLLAAG PCTQIPIAEA MVNYKDEDSC 900
  901 QIFVPFVSDV RIGYLDAQAS LDLEENAAGS NAVGSGLGSG SASSSAIPIG SQSSPNVHGV 960
  961 VSGSPPQQQS LGRISPPLQT PPSSASSHRE RNTSESLSTP SSVQQQSFSG ALAAAEAVEL1020
 1021 QVDYWPLVRP GEGHAKESKG GLSKGSDAGG KNSIKSTFRN LQVWRLPQHA QQLGDMFNGL1080
 1081 TVSFATKEKK QKQIMRLGKK KDKERDLEKE QCVEGVARLI CSPKQSHPVP LRVYIDGTEW1140
 1141 TGVKFFQVSS QWQTHVKNFP IALIGCTPMS CAELS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle