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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0306056, Snmp-PA
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVPRVKLLM GSGAMFVFAI IYGWVIFPKI LKFMISKQVT LKPGSDVREL WSNTPFPLHF  60
   61 YIYVFNVTNP DEVSEGAKPR LQEVGPFVFD EWKDKYDLED DVVEDTVSFT MRNTFIFNPK 120
  121 ESLPLTGEEE IILPHPIMLP GGISVQREKA AMMELVSKGL SIVFPDAKAF LKAKFMDLFF 180
  181 RGINVDCSSE EFSAKALCTV FYTGEIKQAK QVNQTHFLFS FMGQANHSDS GRFTVCRGVK 240
  241 NNKKLGKVVK FADEPEQDIW PDGECNTFVG TDSTVFAPGL KKEDGLWAFT PDLCRSLGAY 300
  301 YQHKSSYHGM PSMRYTLDLG DIRADEKLHC FCEDPEDLDT CPPKGTMNLA ACVGGPLMAS 360
  361 MPHFYLGDPK LVADVDGLNP NEKDHAVYID FELMSGTPFQ AAKRLQFNLD MEPVEGIEPM 420
  421 KNLPKLILPM FWVEEGVQLN KTYTNLVKYT LFLGLKINSV LRWSLITFSL VGLMFSAYLF 480
  481 YHKSDSLDIN SILKDNNKVD DVASTKEPLP SANPKQSSTV HPVQLPNTLI PGTNPATNPA 540
  541 THHKMEHRER Y

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle