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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: KaiRIA-PA
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHFCWISLII LSLSRVQAQF YGGNAYEASS GQSIRLGLIT DDATDRIRQT FEHAISVVNN  60
   61 ELGVPLVGET EQVAYGNSVQ AFAQLCRLMQ SGVGAVFGPA ARHTASHLLN ACDSKDIPFI 120
  121 YPHLSWGSNP DGFNLHPSPE DIANALYDIV NQFEWSRFIF CYESAEYLKI LDHLMTRYGI 180
  181 KGPVIKVMRY DLNLNGNYKS VLRRIRKSED SRIVVVGSTT GVAELLRQAQ QVGIMNEDYT 240
  241 YIIGNLNLHT FDLEEYKYSE ANITGIRMFS PDQEEVRDLM EKLHQELGES EPVNSGSTFI 300
  301 TMEMALTYDA VRVIAETTKH LPYQPQMLNC SERHDNVQPD GSTFRNYMRS LEIKEKTITG 360
  361 RIYFEGNVRK GFTFDVIELQ TSGLVKVGTW EEGKDFEFQR PPQAVNFNDI DDGSLVNKTF 420
  421 IVLISVATKP YASLVESIDT LIGNNQFQGY GVDLIKELAD KLGFNFTFRD GGNDYGSFNK 480
  481 TTNSTSGMLK EIVEGRADLA ITDLTITSER EEVIDFSIPF MNLGIAILYV KPQKAPPALF 540
  541 SFMDPFSSEV WLYLGIAYLG VSLCFFIIGR LSPIEWDNPY PCIEEPEELE NQFTINNSLW 600
  601 FTTGALLQQG SEIAPKALST RTISAIWWFF TLIMVSSYTA NLAAFLTIEN PTSPINSVKD 660
  661 LADNKDDVQY GAKRTGSTRN FFSTSEEPIY IKMNEYLNAH PEMLMENNQQ GVDKVKSGTK 720
  721 YAFLMESTSI EFNTVRECNL TKVGDPLDEK GYGIAMVKNW PYRDKFNKAL LELQEQGVLA 780
  781 RLKNKWWNEV GAGVCSAKSD DDGPSELGVD NLSGIYVVLV IGSIISIIIS ILCWCYFVYK 840
  841 KAKNYEVPFC DALAEEFRIV IRFSENERPL KSAQSIYSRS RNSSQSIESL KTDSEENMPV 900
  901 ED

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle