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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG7678-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKWWSCGSN QESNSIFRSE VMSLVQMYLQ PEAAYDTIAA LGEVGCVQFR DLNAKINAQQ  60
   61 RKFIGEVRRC DELERRIRYV TAELNKEGHK VLDLMDDFPP APQPREIIDL ELHLEKTETE 120
  121 ILELAANNVN LQTSYLELSE MIQVLERTDQ FFSDQESHNF DLNKMGTHRD PEKSNGHLGF 180
  181 VAGVISRERE YAFERMLWRI SRGNVFVRRC DVDVALTDPK TGNVLHKSVF VVFFQGDQLQ 240
  241 ARIRKVCTGF HAHMYPCPSS HSERQEMVKN VRTRLEDLQV IINQTSDHRT CVLQAALKQL 300
  301 PTWSAMVKKM KGIYHTLNLF NVDLGSKCLI GEGWVPKREL ELVEVALAAG SASVGSTVPS 360
  361 FINVLDTKKE PPTHFRTNKF TRGFQNLIDA YGIAGYREVN PGLYTCITFP FLFAVMFGDM 420
  421 GHGTILFLLG LWMVIDEKRL SKKRGGEIWN IFFAGRYIIM LMGLFAMYTG FHYNDIFSKS 480
  481 INVFGTRWVN VYNRTTVLTN PTLQLNPSVA TRGVYPMGID PIWQSASNKI IFLNTYKMKL 540
  541 SIIFGVLHMV FGVCMSVENF VFFKKYAYII LQFVPQVLFL LLMFGYMCFM MFYKWVKYSP 600
  601 TTDVEADTPG CAPSVLIMFI DMVLFKTETA LPGCDVNMFP IQKNLEMIFL VVALLCIPWI 660
  661 LLGKPLYIKY QRRNRPAGPV EEVDEIVEKI EVTTGKEIII TEVAEAHESG GHSEEDDEPM 720
  721 SEIWIHQAIH TIEYILSTIS HTASYLRLWA LSLAHAQLSE VLWTMVLAMG LQMNGYVGAI 780
  781 GLFFIFAVWE FFTIAIMVMM EGLSAFLHTL RLHWVEFMSK FYVGNGYPFT PFSFKDILIV 840
  841 VEDD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle