YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0312051, CG3...
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERLLTMFEE ADPFATWWPT IAALTVGIVI TVRTLMSGQR CPNDNQIKEQ IVVVTGGNSG  60
   61 IGFEIAQALA GRGGRIILAC RNLEAGKRAA AIIKRELGCR TPLNSLDEDD NPEDRYFVEA 120
  121 RYLDLCSLRS VHHFAGQLMA EFERIDVLVN NAGVVFANTQ MPTEDGFERH SQVNYLAPFL 180
  181 LTHLLLPHLQ RSEQGRILFV SAHAHQGAKI DFDDPLNVGT WSVKFHAREA FAHSKLCVLL 240
  241 ATRWMARELK GTSVTVNCCT PGLVRGTRHF RNSPLMSSLC VKAVTYPWMW LFMKNAYEGA 300
  301 QCAIRLATDP QLKEVTGEYF NDCEIAASSV TGQDKELAKK LYMQTIKTLE SVTKLTVDRE 360
  361 EYGLDLQLEM ESELRLEEPA EAEPETETNQ AADEKKWQGN GETKQP

Type	Start	End	Confidence
Cytoplasmic	1	13	0.67
Transmembrane Helix	14	36	0.82
Non-Cytoplasmic	37	406	0.82