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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: tinc-PB
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.27
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGKHQGSGA GASSGGGSLN SSLCNSVMTN ATTASSSLTQ QQQQLQAKYI KSKRHQSRYT  60
   61 SLQHSGHDSG SYLHLNSLWS IWYGVMLTLF QGYLAMHGAY RFLGCSLIPW KIEPVAELNL 120
  121 QIVLSGVVFI LLPVFFTSAV FKVGNLANDG IKLATGARER RCTLSPHDGL EEESRGGTLR 180
  181 ALWTHGGPTA AFVHIVIALC LLLPRLLLEA RIIENGLLPK EQIWATELDF VVINRRNLMA 240
  241 MSVVGATPFP RHHQPSNQQQ SHHQHGRLNL TANSLEQDEE DYFNDTMFTA IRGVPAGGNN 300
  301 NLFDLRPDRM ANGRKAAKTT ATTRTTTTAN KLDAGKGQYF EVPDLINQDI DEEERQELEE 360
  361 AIRGEEDDGD EGVGVGEEGT VIMPDFDELA PRTAVGTSTT TAKASSDADK LNVENWQQLG 420
  421 TLGKADASSS SSSTTSTTTT TTTSTTTTAA TTTSTRGTST TTTTTTIKPM EITTSRQSAH 480
  481 HHHGKSRKHH KHHNKQRQQQ PPRRHHVASH EQAILESFPE EETTTRDSSI HRVRPEVLPE 540
  541 LPIPSTPVSA SNSKIIAIKA KNQKRRISKR AAGVEIEPEY LLGDANINSS EFVAKSNEEE 600
  601 PEESEDFELE DGDFQAVPAL TPAPPAEPNG PKSGQDYVRL DGFAGMLQLF FGIDKPIDVA 660
  661 IFSQPPSAEF VNLLCALLVW SVRYPAVFWN TSKAFACVFS LQMVVAALDI ILGYVGISNL 720
  721 YKLQIYAEAM PVHQPGLILN AVVTLALYLL STALVLASSM VMYLYGHGRL ATRMRDRSII 780
  781 TLKTHQTWIY FAHCASLCFV LALAVVKAPL LNDLSATYKN NLHCPTFLAA LVGVTHLLLW 840
  841 IVIWLCLTIK RRWHFKLPPL DSTYGGLLGK SSAQPLLMSS GQRTGSNSSS SGCNSTSTTV 900
  901 NGGDSKPDMM STATSTELGM GMGMGIGGGI NGGMGGTGMG LAAQEDIYWP KLTPSSPKLK 960
  961 VTFNEVTTIR AVEPRYVLPV LRGKLTTAST RH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle