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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0307033, alt-PG
Protein type: Transmembrane
Type Confidence: 0.59
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFHILIVIG CVVSASLLSF LFINKIFRRK TFEEVVAEKR ALSANLYKAA GGAATKKPKK  60
   61 KELKREKKQR QREQQRDVNN EPEPEEAEDY SDGQSEGQGS VAGEEPGLSK QHVEFEPDAE 120
  121 VLTDQRRPSS VAEKENQPSG AGKKGKKDKR NGANNKTAGI LVNKNETVAV KPAANAEETP 180
  181 TLNNFETKIP KDVVELKKQE QKERKEDNNN KQQSQKKIAG GNVSKKEKVV AVETEAPVVT 240
  241 KQILKQQQQQ QNGSPKTQHN QANNKTKQQQ QNKKQNQKET LTGKDLAHAL DKLADHQNQT 300
  301 IGVNALMNVF SRAELNRSEI QILIDYLLNK QQDMPASHSE WSDDICQKLK RQLEEKEKLL 360
  361 AEEQEASIGI QAKLRELRQE VNTERAQMHA RNQAYIDKLQ GKEQELAALN QELSSLNDKL 420
  421 TLERQQLTTL RREKQANSQD LVQLQHLQQD LAHKEKCLAE MTAFVNAETQ QKNEVIQQQA 480
  481 QQLQALELQR EELEARQNNS IFELEQRKQL EAENADLKQE LSAVQQTQSE LQRVHAAELQ 540
  541 ELRQNLSVLE ARNVALSQQL TQAANSAVQA TAAQSEQAQV QTEALAQKQQ ELSALRSQVG 600
  601 SLTDAHAQQQ KQANALQSQL QEAQQRAEQL QAKEQHLQQE LQEQREKNND VRMKNWKLIE 660
  661 ALQNAEALTA KTKTNSAQSV GQQHKELQLQ QQKAVAANGG GSASSAKSEQ QRIRDLYQRL 720
  721 YPDAVKAQSG NALQASFDQW LEQVLATHVK QQQDKLRQKL DAEKSEKQSS SSHKSTQSSN 780
  781 SSSSNHNSTH NNISSNNSSS NSQSSSAAEQ QELHKQNLQL RECNDKLTQL VTKTTNTLMD 840
  841 LEERAREQDE HWRGIVEQKE QLILTLQQHA SNGE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle