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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG10345-PA
Protein type: Transmembrane
Type Confidence: 0.79
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLFTNKNQR NAKLLRSAAL GMTLLFFGSL VIISDPLQSI LDTQLSLKPG TLLHRLWLLP  60
   61 PLDVYINVYM FNYTNVDEFT SGRASKLQLQ EVGPYVYKEV LSNHNVTYNE SNNTITYSPK 120
  121 REYVFAPERS VGDPKIDRIR APNIPLMGVT TLASSLSMFA ALGLSAITRQ LNSQPMLEMS 180
  181 VHDYMWGYED HLVELASRFV PNWIDFSSFG IMEKLFREGN ESNVFNMNLP EPKDKYGMRM 240
  241 TDAPRGYTVD SINGERGFKG WQYNEETNGT MCNRIWGSHD ATLFPLDMDE NDEFFLYRRT 300
  301 FCRRLPVKFN RTTTFNGLDA FEFVMEPDSF DSEVDNANSS CYCKNNRCLK KGVGNVSPCY 360
  361 YNIPLAITYP HFMHADPSLL EPFDGLQPNV SRFTSTFVVQ PQLGAPMQGT HLRLQANQVV 420
  421 GKVNFNRMMT PFENMILPLL WVDLNIDVLC LTLRLLIHGI KWGFPLLQWS AALGMLLAGV 480
  481 YQLCSALLLC FWPTARQFQK VDQVERGTAV QVIGVGLGLA TGLRKPSIHL DPEEQHHLLL 540
  541 GGGSFIPKMA KT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle