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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Sb-PA, FBpp0310459
Protein type: Transmembrane
Type Confidence: 0.88
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQPTLIRPR LRHRRSTPAA ATKMCPKRHW LVNNRAAGSR GSGGAAARSR RSLDQIVEVL  60
   61 VALIVVNCLA TAAAALITPP DSLESLGSLG IPSSSASSSE DDDDMSSGFY RIPHRLEGYP 120
  121 QLQQLQRGQN FKISPKPCSF GRVEGTCMFV WECIKSEGKH VGMCVDSFMF GSCCTHNYTD 180
  181 NIVLPQTAFS YTRPTKPLTL RPRPPAAPYK PMISGMTTIE RPHGAGTLVI RPSGPHHQGT 240
  241 LARPHPPPYQ SKPTTASDLH GSASHPSSSS SSSSSSNPNS IWHTSTQQQQ QQQHQQNQQN 300
  301 HWQMTTEPSF ITKPRPTGWT KPGIVNLPMP ARPSKPSKPT KKPIVYDRTP PPPPSVPPST 360
  361 STSTTSTSLI WPAQTHPPQP HRPTRPQLSP GTSLAASSSS HWPSSTTSTT SSTTSTTTTT 420
  421 TTTRRTTTPT TTTRRTTTNK PTRPYQRPTT ATSSSSTSTT SSKTPTTTRP ISSSSSSSSG 480
  481 IVTSSQRPTQ PTHRTPVLAT SGIETNEISD SSIPDAGALG HVKTISAARS ECGVPTLARP 540
  541 ETRIVGGKSA AFGRWPWQVS VRRTSFFGFS STHRCGGALI NENWIATAGH CVDDLLISQI 600
  601 RIRVGEYDFS HVQEQLPYIE RGVAKKVVHP KYSFLTYEYD LALVKLEQPL EFAPHVSPIC 660
  661 LPETDSLLIG MNATVTGWGR LSEGGTLPSV LQEVSVPIVS NDNCKSMFMR AGRQEFIPDI 720
  721 FLCAGYETGG QDSCQGDSGG PLQAKSQDGR FFLAGIISWG IGCAEANLPG VCTRISKFTP 780
  781 WILEHVR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle