YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7299843, gi|2...
Protein type: Globular with Signal Peptide
Type Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSAGASSW SGSSGGSNSS QGRSIATAQP AQEERLVVAV RVRPSMEATE RCIEVISGGS  60
   61 LLYDDGGKSR PRQYSYDHVF RENDSQEQVY KTTTAPLTHT MLGPVPRKKP QTSDRAPPTA 120
  121 SCDSTDVSSQ DIGLMVRAIE DIFSHIESAE AYSCRVSISY LEIYNELIRD LLNPGGPLEL 180
  181 REDHRGQRIT VAGLSEITTS SRKEVVSLLL KGNKARTMEP TAANQTSSRS HALLSIMVQA 240
  241 RTPLGTKQGR LFLTDLAGSE RAKKTKNRGK RLQEGAHINR SLLALGNVIN GLSGGARYVN 300
  301 YRDSKLTRLL KEALSGRCKT VMIAHVAPES KHRDETKNTL VYADRANSIT TKLQNSVYID 360
  361 EFKDFPTKHY QSLVSELRDE VSRLRTKMLT ERPRSGAAAA AAAAAASGSA GTAGSGAGSE 420
  421 AVQEQDEQRK TELRYLREQI VLTFKQQMKL RRKLLEAESH LLGLELDAER QHMIISHWQG 480
  481 RIGKLYDAMG DDDIESEGSV ALKNAWGELA AIEKETRRYK EIRERTEHEL EQCRQKGVKL 540
  541 EDELPERISS DEERELLALL CRVHELEADK VSLQAERLAR QAELRRRDLQ LLRAERQRRL 600
  601 CEDIISSQRR LIEEGNVDLP DELRELYGLY QQEIHAGVVT PSTSNYERKL PPIYTAGSDS 660
  661 PGSSSSSEWS PASPLPQIDN QMDPVDRVMG PPVNPRLPRL SAATSANVPA GGSRRPSLRV 720
  721 ARNPHPHP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle