YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	yellow-f2-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSPQFLILS LISGLQLLSL ADADPMIEVF RWKQMDFYNR GDGHLSSGGR KDRPSFSAPV  60
   61 VFPGKYSRRK RKIMTSRDTP VVVSSRADSD DPNASYIPYN NVPMGATHFR GRLFVTMPRR 120
  121 RVGIPSTLNY IDLAEDGSNR SPKLRAYPNF ALNQFNASAE NLVSVYRTSV DACQRLWFID 180
  181 TGMLEYPNNR QQIRRPSIWV VDLATDQVLK RFDVPESIAE TGRGLASITV DVKAGQCGDA 240
  241 YAYIPDLVYR RLYVYHLRND RIWSFEHNYF NFDPLSGDLS IGGQTFRWDD GIFSITLGAQ 300
  301 KLDGSRDAYF HPMASTNEFV VSNRVLQQES NAARSDHGND FRVLGSRGPS TQSTMHAYDP 360
  361 GTGVIFFDEI QRNGVGCWKT SKPISAENYG SVDSNAEDMI YPSDLSIDED GTIWVMSNSM 420
  421 PIFIYSTLDT SIYNFRIWKQ KASLAKRGTV CE

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	452	0.99