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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Cpn-PB
Protein type: Globular with Signal Peptide
Type Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPGTIPSPV SAPVAAPVTP SAVAAPVQVV SPAAVAPAPA APIAVTPVAP PPTLASVQPA  60
   61 TVTIPAPAPI AAASVAPVAS VAPPVVAAPT PPAASPVSTP PVAVAQIPVA VSAPVAPPVA 120
  121 ATPTPVAPIP VAAPVIATPP VAASAPTPAA VTPVVSPVIA TPPVVPANTT VPVAAPVAAV 180
  181 PAAVPVVAPV LAPAVAPAVA PVVAETPAPP PVAEIPVATI PECVAPLIPE VSVVATKPLA 240
  241 AAEPVVVAPP ATETPVVAPA AASPHVSVAP AVETAVVAPV SASTEPPVAA ATLTTAPETP 300
  301 ALAPVVAESQ VAANTVVATP PTPAPEPETI APPVVAETPE VASVAVAETT PPVVPPVAAE 360
  361 SIPAPVVATT PVPATLAVTD PDVTASAVPE LPPVIAPSPV PSAVAETPVD LAPPVLPPVA 420
  421 AEPVPAVVAE ETPETPAPAS APVTIAALDI PEVAPVIAAP SDAPAEAPSA AAPIVSTPPT 480
  481 TASVPETTAP PAAVPTEPID VSVLSEAAIE TPVAPPVEVT TEVAVADVAP PEAAADLIIE 540
  541 PVEPPAPIPD LLEQTTSVPA VEAAESTSSP IPETSLPPPN EAVASPEVAV APITAPEPIP 600
  601 EPEPSLATPT EPIPVEAPVV IQEAVDAVEV PVTETSTSIP ETTVEYPVAE KVLDPAITEA 660
  661 PVTTQEPDVA NINDGAPATE ITTPAVEIVT AAAEVSDTAI PLIDPPVPQE IAVAEIPETE 720
  721 TKPAEVIVEQ STIPIEAPVP EVSKYAEPVI SEAPAAEVPI TAGDNPDNTS VGISEVVPTI 780
  781 AEKAVEEVPT SEIPEQSSSP SDSVPVAKIT PLLRDLQTTD VSLLAIAATL DAIGEKLKDQ 840
  841 KARNQQVMDR LCEIEKILGP PKSN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle