YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG7994-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEDVYASLG AYNDSGGDDW SSSEHLVLWE EDETQRTTAN ATSRHNQLHV ARWNATGNAT  60
   61 ISATFEDVPF DANNYWALLA LVLVLGTAAG NILVCLAIAW ERRLQNVTNY FLMSLAITDL 120
  121 MVAVLVMPLG ILTLVKGESF VPFKVRNRVE EYNNQSQRQK RGKDIQARTS CDVANTRHEL 180
  181 HLMKLLVGMA LAVCRLHYVS DISIKAGKHV ATLMTVLFVR FGSHYKHKHK HKHEHGHQYK 240
  241 QKGRRTHTQT HTWSNPWQSG QCSKKEDQQM AACYIKCEKY CSGSDRSSCC CSCTGTRPPT 300
  301 GGKKGRNRDL PAVKGFAEGP ATEAEISSEQ QALDPKD

Type	Start	End	Confidence
Non-Cytoplasmic	1	75	0.60
Transmembrane Helix	76	100	0.91
Cytoplasmic	101	109	0.72
Transmembrane Helix	110	132	0.90
Non-Cytoplasmic	133	337	0.61