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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG7918-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSLNKSAGE EELTGLNGNS SDSIYTIKNK WITDWSLRRE RDKLCSFIFK RVLTHTECKR  60
   61 LLEAAKIYGE SSDFNSWPVN EQLQWYRNFD VNNTNLLLAV RNQSSDGGST MSGSSSDSEI 120
  121 LGPVLPPFAL WQTILIAICL AICIILTVGG NILVLLAFIV DRNIRQPSNY FIASLAATDM 180
  181 LIGTVSMPFY TIYVLKGYWD LGPMLCDLWL SVDYTVCLVS QYTVLLITID RYCSVKIAAK 240
  241 YRSWRTRTRV IYMVTITWII PALLFFISIF GWEHFTGKRD LLPGQCAVQF LKDPIFNTAL 300
  301 IIGYYWTTLI VLFVLYAGIY KTAYDMQKRS EAKQRKMQSM VALSAGAMSG MAGHAAGIGV 360
  361 IEEKILKTKV ELAGDQTDLD SACTTVIKRL SGSGQANPLA VATEEVEKMT PEQRRASAAK 420
  421 IQEEAKKREA AVDAEKSERS SSPAFDSDEE SSVNQAQQLI TQQKLNNMRK RSSIGLVFGA 480
  481 QAALLATRGK GNLQKSTTNS KSIEAMHQYH HHQQHHHNQS PLQRAQSKEE MRSLHHHQNQ 540
  541 QQPHHQHHQN QPNPPLDRPK RTSCSTLSQI AEHDRLVDLS APPTLLNTSD PLSPVDLAPI 600
  601 EVPSDQVHQG LVQTILPPPD AFQCPTPLSD DYSDRPFGNS SGNSELALTY DLMTNSELRY 660
  661 MDESSAMLAS VTANSTTSPN DSVQGKPPVL PPPPPARRNP PKSNLNQSLS QTPSQNQSPS 720
  721 QSLSLNLNPN HNQSQSQSIE EAVAIEKRLL VSYTGIEDFA KVRRESCIEA ICLLDVPGKL 780
  781 AADCPHRRAS SPMETSSKDA ILYSPMPPMP LSPKVKTSTP QTGTPQSAAG VTPPVPLERI 840
  841 EERETSDSNT NKMPSTSGTT SSTGGVGGGG EQDGVGATKK NAGDDDANRE EKSLAASRNS 900
  901 SKRAFIHSIG KHFKSKKALP LILGVGGRQK SKSENRARKA FRTISFILGC FVACWTPYHV 960
  961 LALVEGFCRH PPCINEHLYM FSYFLCYANS PMNPFCYALA NQQFKKTFTR ILKGDLHMT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle