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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0308770, CG2...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.94
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQEKWLLPAL SLALLLGTCS ALYEDQIKKF DWRGVNVGAL KQSRVDLNHF QPRILVTTYE  60
   61 GVVASLCVKT GELVWRQVLE QKPRGDVKLL QVSGFADDSS DTAAAPMGSN MGFDMLTVQG 120
  121 HAPALVRGWN TNMGALEWEW SIMPMNTERA QDAMWIYSKS VLYHVLPAWR SHLEVTAYFA 180
  181 SSGHSTGSTS KVIAPWITSE SCTLSGTFYV CTDGKQLISL DLVSKSGQVI RTSLEAEPKG 240
  241 KTQALTGLNG VVIVDGKPIS VNKDQSICGD LRSSSFAVGS FNYRKVLAYA DLSSGILRIN 300
  301 ALYLDNCAPA AELEQSLPFP EHFGTPSLSN FDCKQKRNGE GKNCLFLFSS TSESIVAVQH 360
  361 GRVRWSREES LANVIDSQFV DLPLADTEGT LENEMKGKAG DFTSFERDIA SAFLRRITTQ 420
  421 AVQIRSLFLH VIGLGPPPTD TQRAGLVRDS FGLHKMLVLL TRAGKIFGID NVSGKHHWQL 480
  481 HLPNVIGFAN DEQMRLIVQR SAKHFPLQPL CTILGKNAVS GNGVLYRFNP ITGKVAEGGL 540
  541 VQLDYRIKQL SLLGETEKDF LKGILLLDAS NKVHVYPEHA APLADGMYLY TADLKTAELA 600
  601 GYFVKYAGGQ LSSTHIWNAR LGGHNSEQQI IGVAGKNPIE HVHSQGRVLG DRSVLYKYIN 660
  661 PNLVAFVTQA PDSTHKSVLN LYLVDVVSGS VVFTMTHRKV RAPLSIVHSE NWLAYSYFNE 720
  721 KLRRTEITTI ELYEGKSQAN SSVWSSLQAP PMPLVERQSY ILPTIVEALR ETITERGITN 780
  781 KHVLIGTASG SIVEMPWHLL DPRRPIASTT QGREEGAIPY IPELPLPTES HINYNQTVAR 840
  841 LRNIYTAPSG LESTCLVVAT GLDLFVTRVA PSKTFDLLKE DFDYILISIV LVALTSGSLI 900
  901 VKHLASRKLL KQAWK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle