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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0297111, CG3...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFRLAAFWL FLLTVGGNHK LLSHVSPMGV AAEKQPLHKG NELENAMKLR EAPKQSRVIG  60
   61 DITTTIQPDS DPGRSIGHQA LRRAKAPPPS LELHFRQNLN KLFAGDETTH VGHTNATDNT 120
  121 TAAVLATDEG SSEHEPSTTH HPERRHVVPD KLQYTQEIQV KQGRLMGITR RFQVTSGLRQ 180
  181 VDQFLGLPYA EAPTGNRRFM PPGAPLPWQG LKIARHLPPV CPQKLPDLSP HGSENMSRAR 240
  241 HKHLSRLLPY LRTESEDCLY LNLYVPHEEP QSTPKQYAVL VYLHGESFEW NSGNPYDGSV 300
  301 LSSYGEVIVV TVNYRLGVLG FLRPSIDAHN IANYALLDQI AALHWIKENI EAFGGDNSRV 360
  361 TLMGHSTGAA CVNYLMVSPV ASGLFHRAIL MSGSAMSDWA ASNQSLQLTM QIAHALECPL 420
  421 NEHVEAEDDD VLLDCLRHRR YQDILHIPTA LTQFSTSLGP IVDGHVIPNQ PYKVMGHYTE 480
  481 HFSRYDLLFG ITESESYHTL AALALEEGLR ENERDNLLRF YMQSRFDIRP DLALAATLKK 540
  541 YQDMYNNPIK ATNLEHRDVV LDILSDARVV GPLLQTGMFH ADVNRRNYMY VFGHNSATGP 600
  601 FAHLPHSIMG EELAFIFGAP LAAAGPFPSG NYTVQEKLLS EAVMAYWTNF VKTGNPKAPW 660
  661 KGIFINSHAL EWDRYDLDWP EFNRRAQAYL NIGIPPTVGY KYRQIYMNFW NKELPDELNQ 720
  721 IAAIQEQLQK PGQEVITGHM SKYGPRDHGA EDPVRTLKLL LQEPSLAGPT QSGESTETAA 780
  781 ENMYNAPPTF GHVHKMQGGS DFEDLVTSTN SLESGEDHPQ APPETVAKSE ATMQLLIALI 840
  841 TIIIVLNLLI YGTFLLRQRR RRAKALPFPA PKLGGTILSY DGANDEELKR CSKSRDGDDS 900
  901 FVLEMTRKSN TYEAIKTGQR SLSCSTVDTH TKVCEWMSSQ EAPKSGSFNT ATPPPQPILS 960
  961 DGRLIICQDI EVADAALLIP QHMHEPQHYE MLLQRQHSAL TEPSDEILQQ QYPLRNHSHS1020
 1021 HSDPVDMILA ADEQVTSFVH ADDVDINVTS RDDSDGLEVI PLTSAQQLEL LRQRNYPKVL1080
 1081 PTEQDLINSS YKRNSLPPQN FNAPLPPPRT ISNTLGRRRR DSSNITTSPL QVARDCGGED1140
 1141 EDLKEPQITQ NTLIVGPIVP KSPASSLKRV KRMPESSAMT ALSGSFQSFE AVPPAHETTP1200
 1201 PQGGERTECI YAIRPSPGSC SWAAPNGDLY AQPMKSSSRN SLIPRPTKPA ESQSQATPAG1260
 1261 PAGESLGSTG MATASRIPQL QRQASGKDLQ ARTATDNTAN PLGCQPRTDS TISSGSSASY1320
 1321 ASTTDSSSSS STGTVRTELQ QFQPAPGRSI TTNI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle