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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Syt4-PA
Protein type: Transmembrane
Type Confidence: 0.88
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEEYIPDAS VMDTIVPAIL GLTAAAVLSS VACICARQMR LRNKKQSQHD ASFPFQPTRR  60
   61 PTAVRSPSGQ PPHYLKKSPS PTGGKQMGLL SPMQDQSTSP IAQPNVKYSE EGDGPAQHAE 120
  121 QQNGNQLTVV DGNGLKHSLH NSLHHSPVET IANGSVTITL DDHSLTNGKE LTVTDQYGKL 180
  181 GTIYFKLRYL AERNALMVSI IRCRGLPCKG GSSGTGDIPT GMNGRTQAAT DPYVKLQLLP 240
  241 DKQHKVKTRV VRNTRNPVYD EDFTFYGLNM NDLQNMSLHF VILSFDRYSR DDVIGEVVCP 300
  301 LTSIEIGDIS KEALSISKEI QPRSLKIRAQ GRGELLISLC WQPAAGRLTV VLLKARNLPR 360
  361 MDVTGLADPY VKIYLLYNGQ RIAKKKTHVK KRTLSPVFNE SFAFDIPAAE GAGASLEGVS 420
  421 LELMLLDWDR VTKNEVIGRL ELGGPNSSST ALNHWNEVCN SPRRQIAEWH KLNE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle