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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Alh-PC
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMMMDTMDTS QSQPMDVAPA VAVAATSGAA LVDFTAAMVS MAATAEAESA ESNNNHIDMA  60
   61 EYKEHRKNKK KKREKREREG KEHRHHKHRD REHREHRRHR DRDRDKERDR EGHHHHPTHH 120
  121 HPNNSQHSTS ASSSPSSAST TPSATIEYVG GSASASPSYL GGGATGTGAA VGATTTYPHN 180
  181 LKIRFLLSGQ RTELSPPTHQ TSATAEVNAP LASSTSASIA VTASATAASA PPATGTTTLG 240
  241 SSISGNAGST SSGNSSGVSA TGGAQSAVGS GGYPKTESSK SSGTASAGSG SGSSSNTSST 300
  301 KHGSNIKDIS SSSNQQASTA SSSSAPSLYV SVPLSTANVP GINLPTSSTS SSTTSESHSA 360
  361 SSRSSGAQSQ HQQQLSNALV GPPMGGSAGA FHGGTTSAGS SSVIQQQSGK SSPALGTLVS 420
  421 GNSGGSIISA SGFPLPSGNL TATTTESGNL KISYEKQTTR VQQLQEQEAP PARRSRTLDL 480
  481 STASASSSSP SAVPATTSPL VVLSNQLPLN SVAASSSTGG LKFTYESQTQ MDVPMMPVSA 540
  541 IKDSPPSSPG SEIGSAMHSA TTAPGSLTGA STAATAQPGN VRKRGRKAKD ATIAAAAAAA 600
  601 AAAAALSNSQ QDLKDVRILQ NGASNTPGNP AGSTPTPPAT PASSNAVSSA SSIITHTAAH 660
  661 MLGNQINPNS SVAQKLSEQL HMEVQDHSIY TPDSMNSQYA GVPFPGKQRN STAVPSNATP 720
  721 AQNPLQSMFS GGGMNGNMPI PQSLEQLLER QWEQGSQFLM EQAQHFDIAS LLNCLHQLQS 780
  781 ENLRLEEHVT SLIARRDHLL AVNARLQIPL STIASNTKAE AHAAISTTAA PTTTTTTSTT 840
  841 TATSTCTTSV ISTIASSGNS STSTIGLGSS TSALNAATTI AAAVSLATTA INTTIPTMAN 900
  901 SRPTVAAASS SGVLDYRGPG ATSNSSNSNS SNNTISNSVS NSSSNPTSSS SASVPPASSM 960
  961 SISGMSISNA TNLGMR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle