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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: rpk-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTISDSELDS SKGIDLTFRR RRKAGSVACE GFITTYHEYC RNTSIHGVQY LGEQERPFRE  60
   61 RIFWLFVFLI SIYGCSTLIQ SAYTKWTETP VIVSFAEKST PVWNIPFPAV TVCSETKRVL 120
  121 KQKGKETTYA DLYSQFSEDM RASRVFRPEN VSALEMEEFR TLLHVCNTQI IEEDIPLIAG 180
  181 DDLDYFDVLQ RMLPQFDRYF FYCRWLSRFG ECETFFRKTL TEEGICYTFN GLRATEIYRD 240
  241 DTYQYQHSGE PLEMENISSQ HTAWTLETGY ALDSDVETFP ARVLSAGARS GIFLALQSFK 300
  301 QEVDYACRGP VQGFKVLLHA PDDVPQVSKQ FVRIPMGKEV LIAVKPNMIT MSSGIAEYHP 360
  361 VRRQCFLSHE RSLRFFKVYT ESNCQLECLA NFTLTKCGCV KFSMPRNVDM PVCGEDKIHC 420
  421 YDRAERELLV REFKRVKALN AGRENSRSVE SACNCMPACT SLVYNTEISQ ANFDLEEMLV 480
  481 AEGDTEFLKE YPGSQMSRLS IYFKQSQFIT SKRSELYGMT EFLANCGGIF GLFMGFSILS 540
  541 LVEMIYHFTL RLFTNLKRLV KG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle