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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Cont-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAKIGLLAS ILVLNLVGQI TPQFSENLPD PDPQSGQQPQ NYQPSYNKDY SPRYNPLYTG  60
   61 QQSADPNQFD NTLVDGQSPN TYKGYYDGRA GGGGLGGNVV GPGNNLGGLG PQYDPFNRNS 120
  121 IGSAGVSYRD AYTDEDNFCP EHWVSFRQTC YRFIRSPKRN WAEAKKICKA HNADLINVDN 180
  181 VEKHSFILKN LILQNQRQNR FFISARQTGP LNWVNDDNTQ LVQIEDSFSM DEQVPLENED 240
  241 LHDNRFLVQN DLNNQNINNP NQFYNSLPGT VNQRNQNNLR GFIGPNQPYG DNRYVRDRVV 300
  301 YAFSKKRDRW MFMPAYEIEL NLFICESKVL YSSDNVNIKL DDKRPYHYGL DINDMERIPR 360
  361 GPYFVKQPND TTFDVNKNRL INDVTLSCLA NGYPTPSYTW YREVYVDDRL EYQKIDPLAQ 420
  421 DRYTISGGNL IIYEPKQALD QGAYHCVAEN KFGRIRSESA HLNFGFIMEF NLKRSAETSE 480
  481 MNWGKSIFCD PPQHYPDVRY YWARDYFPNF VEEDQRVFVS RDGALYFSFI ETVDRANYSC 540
  541 TVQTLVSDTG RNGPFFPLRV TPNSNYQALI FANTFPKVFP EAPVAGDEIR LECMAFGYPI 600
  601 PSYNWTRQGL PLQRNAYTIN YGRVLIIQNA TTNDNGEYSC TITNPRKTLM KSIYINIQMR 660
  661 PQFTIPLKDM IKDYNSDVTF ICEAFAIPDA NYTWYKNAER LDPANINRDR YIIQDNVLTI 720
  721 KFLEKDKDDA MYQCGAQNQL KTSFSSAQLR VLSMKPSFKK HPLESEVYAV YNGNTTIVCD 780
  781 PEAAPRPKFQ WKKDGQVIGS GGHRRILPSG TLTISPTSRD DEGIYTCIAS NQAGTDESHA 840
  841 RVIVLQEIRF IETPPQRIVS KEHDLIFLHC EAAFDELLDI AYVWKHNGEV LKNNHDGTGR 900
  901 IIVDWNRLTV HNTSMRDAGD YECVVKSAVN EISSKTSVSI EGAPGAPGGV QVIQISKTKA 960
  961 IIEWVDGSHN GRAIRYYNIL GRTNWNRTWV NVSTHVQARE VDRYTSRQQA EVVNLTPWSA1020
 1021 YEFSVTAVND LGIGTPSAPS PIYSTYEDKP YIAPRNVGGG GGKIGDLTIT WDPLLPQEQH1080
 1081 SHGIHYKVFW KLKGAIEWAS DEIKKQDHMG VAVVNIPLNN YYTEYEVKVQ AINSVGKGPE1140
 1141 SEIAVIHSAE DMPQVAPQKP IALAYNSTCF NVTWQPIDMS RENIRGKLIG HRLKYWKTTH1200
 1201 QEEDSVYYLS RTTRNWALIV GLQPDTYYFV KVMAYNAAGE GPESERFEER TYRKAPQKPP1260
 1261 SSVHVYGINP STVRVVWRYV SPSQDEEPVE GYKVRIWESD QNMITANNTI VPIGQKLESY1320
 1321 INNLTPGKSY NMRVLAYSNG GDGRMSSPTL HFQMGKTTRN GANTRHGHNI NTALILSTLL1380
 1381 LISTFLYTSQ 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle