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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0307588, Syt...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVTSASGLD STPTLGTIEV TTLLGAFFGV LVLLLLLFLF ISRKCCFHYR HAINCCDERH  60
   61 LAVKCVQKIT RKRRYENTSS DSEEDILRRL RWHQQHQLGE KPGGYGLGIS QANPLTAQSF 120
  121 NYHQAGASAD LQRVTVSRDP LAIAERGKVG IPSSHSECSS NDSMEVSVDS HTGVLTGLSK 180
  181 ATTTVPHPAT AFRNPCGEHR AKTQALRYQH RVNVAAPPKL DKERDNVLVV PMVNAYSINN 240
  241 NNNSITTSNN HPSSNNNDDE PLFDTSDLRS IKSDDLLVGV DQKEPAVQRG PIELELSLLY 300
  301 DAPMRKMTVH VMQAKNLPPL GSGQTTHTQV RMLMLPSKKQ KLKTKIRSGE NPQYMESFLL 360
  361 HRVNPEDVNN MGLRVRLYGC ERLRKERLIG EAYVSFATVD LELETNLWLP LEPRNTSSGL 420
  421 GSTSDLLSLA RSESAGSTSS MQHGGVSELL LGLSYNGVTG RLSVEIIKGS QFRSLSLNKA 480
  481 PDTYVKMVMV SSIGQEISRA KTSIRRGQPN PLFKETFAFQ VALFQLNDVT LMISVYAKRH 540
  541 MKKNEMVGWF SLGLNSSGSE EVAHWADVCE MPKGEMLARW HVLVDS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle