YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	fng-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.42
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSLTVLSPP QRFKRILQAM MLAVAVVYMT LLLYQSAYGY PGIQVPHSQV DALASEAVTT  60
   61 HRDQLLQDYV QSSTPTQPGA GAPAASPTTV IIRKDIRSFN FSDIEVSERP TATLLTELAR 120
  121 RSRNGELLRD LSQRAVTATP QPPVTELDDI FISVKTTKNY HDTRLALIIK TWFQLARDQT 180
  181 WFFTDTDDHY YQEKTKGHLI NTKCSQGHFR KALCCKMSAE LDVFLESGKK WFCHFDDDNY 240
  241 VNVPRLVKLL DEYSPSVDWY LGKPSISSPL EIHLDSKNTT TNKKITFWFA TGGAGFCLSR 300
  301 ALTLKMLPIA GGGKFISIGD KIRFPDDVTM GFIIEHLLKV PLTVVDNFHS HLEPMEFIRQ 360
  361 DTFQDQVSFS YAHMKNQWNV IKVDGFDMKT DPKRFYSLHC QLFPYFSFCP PR

Type	Start	End	Confidence
Signal Peptide	1	39	0.48
N-region	1	30
H-region	31	36
C-region	37	39
Cleavage Site	39	40
Non-Cytoplasmic	40	412	0.95