YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	fbl-PE
Protein type:	Transmembrane
Type Confidence:	0.75
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVPTRNSKY SFNLKIFKLH NDKKPTSPSP PTSPVISAKR NSWRASWRSA LGSKSKSIAM  60
   61 ASDSSSDPID LEAEPVFFEH SRCNSYCSSS SAFTELPHPA IQIPQGDELM SMPWFGMDIG 120
  121 GTLTKLVYFE PKDITPDEQD REAGILRNIR RYLTKNSAYG KTGHRDTHLQ MDNVEIRKRR 180
  181 GSLHFIRFQT TDMGNFLSLA KQKGMAELVT TVCATGGGAF KFEQDFRDQV NMKLAKFDEL 240
  241 DTLIKGILFA DLHNRTECYY YENARDILKS EKQQFNFSQP FPFILVNVGS GVSILAVYGP 300
  301 DNYKRISGTS LGGGTFLGLC CLLTGCTSFE EAIQLATKGD NRKVDKLVKD IYGGDYNRFG 360
  361 LPGDLVASSF GQMHLNDKRV SVSREDLANA TLVTITNNIG SIARMCALNE KIDRVVFVGN 420
  421 FLRVNPISMK LLAYAMEFWS NGTMKGLFLE HEGYFGALGC LLQFNGELAA ALNDGVEHSI 480
  481 HTESDSASEA AQTSSTADEP PEKAPTSKHS TR

Type	Start	End	Confidence
Non-Cytoplasmic	1	279	0.86
Transmembrane Helix	280	299	0.69
Cytoplasmic	300	307	0.51
Transmembrane Helix	308	327	0.62
Non-Cytoplasmic	328	512	0.79