YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	fbl-PB
Protein type:	Transmembrane
Type Confidence:	0.75
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEDEQINLR NQLARAMPWF GMDIGGTLTK LVYFEPKDIT PDEQDREAGI LRNIRRYLTK  60
   61 NSAYGKTGHR DTHLQMDNVE IRKRRGSLHF IRFQTTDMGN FLSLAKQKGM AELVTTVCAT 120
  121 GGGAFKFEQD FRDQVNMKLA KFDELDTLIK GILFADLHNR TECYYYENAR DILKSEKQQF 180
  181 NFSQPFPFIL VNVGSGVSIL AVYGPDNYKR ISGTSLGGGT FLGLCCLLTG CTSFEEAIQL 240
  241 ATKGDNRKVD KLVKDIYGGD YNRFGLPGDL VASSFGQMHL NDKRVSVSRE DLANATLVTI 300
  301 TNNIGSIARM CALNEKIDRV VFVGNFLRVN PISMKLLAYA MEFWSNGTMK GLFLEHEGYF 360
  361 GALGCLLQFN GELAAALNDG VEHSIHTESD SASEAAQTSS TADEPPEKAP TSKHSTR

Type	Start	End	Confidence
Non-Cytoplasmic	1	184	0.70
Transmembrane Helix	185	204	0.67
Cytoplasmic	205	210	0.40
Transmembrane Helix	211	232	0.59
Non-Cytoplasmic	233	417	0.68