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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: pip-PL
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLNAERSYK MKLRDVENAF KYRRIPYPKR SVELIALLAI SCTFFLFMHT NKLNSRLKEM  60
   61 EVKLQPSEFS ALGLTGNHIS GHDAGKHDDI NTLHGTYQYL KSTGQKVGYN VHDRRSSEEQ 120
  121 LRTPTAHGHH HDHHSHHHHM HQQEKIDGHK HKASHDKQLA VPDNKHKEDE VHYEDDEDEV 180
  181 EENDDDLAND VGTTDSEGFN FKADLLNNTK YAEVDFVFFN RVPKVGSQSL MELMARLGKI 240
  241 NGFTHARNKG SAHETIVMNK QRQNDLIADL LTRPKPHIYS QHIAYINFTR FHLPKPIYIN 300
  301 LIRDPIDRII SWHYYIRAPW YYRDMQAKLG ENAIPMPSEE FMNLDLDTCV RNHDPHCTFT 360
  361 QMQIKNPVGD HRRQTLFFCG MNQKLCMPFN SEAAMQKAKR TVETEYAVVG TWEDTNITLS 420
  421 VLEAYIPRYF RNAKVAYYLG KDRLSRVNRN NVTRIVSDET RLILRKNLTN EIEFYEFCKQ 480
  481 RLYLQYAALS HGKRFGEDDY LLVPEQQNEY NEDY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle