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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG3961-PA, CG3961-PC
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPEKSVMAY VNHLIVSNFS YFWDEIDGYL YYLGGTLGTL TLGSLAASVA YYFATRPVPE  60
   61 RPLVPLENQS PLLEGPEQIH VSKFYKESKN GKFVSYITEN VRTLYQTFRE GAYASNNGPC 120
  121 LGWRETLTSP YQWINYDEAL LRAKNFGAGM LALGARPKQL IGIYSQNRPE WILYEQGCYS 180
  181 FSLVVVPLYD TLGPDACAFI IRQTDMQVVI VEDDGKAAML LEKAPRSLKI IVAIKPIRQT 240
  241 TLERARSRGI QIFSFIDVEK LGAKGNHPEV PPTAEDLCTV CYTSGTTGNP KGVMLTHGNV 300
  301 VAGVCSVILQ MGDHRIRAGD VMVSFLPLAH MFERCCENGM YYVGGCVGFY SGDIKELTND 360
  361 LKMLKPTVMP AVPRLLNRVY DKIQNDISAS GLKRGLFNMA MRAKEKEIAR GVLRRNGCWD 420
  421 KLVFKKVHQA FGGNLRLMVV GSAPLAGNVL TFMRCALGCL VLEGYGQTEC TGAITLTVQG 480
  481 DHVPNHVGPP VSCNAVKLVD VPEMEYFANQ NTGEVCVRGS NVFHGYYKDP EKTAEAIDSE 540
  541 GWHHTGDVGM WLPNGTLRII DRRKHIFKLS QGEYIVPEKI ENIYTLSQYV NQVYVYGESL 600
  601 KSCIIAVVVP DTDVLKQWAT ENNVRGTLSV LCNNKNVKEL IMNDMLNWGK QSGLKSFEQV 660
  661 KDIYLHPDPF SVQNGLLTPT FKAKRPQLKS YFKPQLEDMY KHLD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle