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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0297725, FBp...
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAVQAAAAA TSSGGSSGSV PGSGSGSASK LIKTEPIDFE MLHLEENERQ QDIEREPSSS  60
   61 NSNSNSNSLT PQRYTHVQVQ TVPPRQPTGL TTPGGTQKVI LTPRVEYVQQ RATSSTGGGM 120
  121 KHVYSQQQGT AASRSAPPET TALLTTTSGT PQIIITRTLP SNQHLSRRHS ASPSALHHYQ 180
  181 QQQPQRQQSP PPLHHQQQQQ QQHVRVIRDG RLYDEATVVV AARRHSVSPP PLHHHSRSAP 240
  241 VSPVIARRGG AAAYMDQQYQ QRQTPPLAPP PPPPPPPPPP PPPQQQQQQY ISTGVPPPTA 300
  301 AARKFVVSTS TRHVNVIASN HFQQQQQQHQ AQQHQQQHQQ HQQHQQHVIA SVSSSSSSSA 360
  361 IGSGGSSSSH IFRTPVVSSS SSSNMHHQQQ QQQQQSSLGN SVMRPPPPPP PPKVKHASSS 420
  421 SSGNSSSSNT NNSSSSSNGE EPSSSIPDLE FDGTTVLCRV CGDKASGFHY GVHSCEGCKG 480
  481 FFRRSIQQKI QYRPCTKNQQ CSILRINRNR CQYCRLKKCI AVGMSRDAVR FGRVPKREKA 540
  541 RILAAMQQST QNRGQQRALA TELDDQPRLL AAVLRAHLET CEFTKEKVSA MRQRARDCPS 600
  601 YSMPTLLACP LNPAPELQSE QEFSQRFAHV IRGVIDFAGM IPGFQLLTQD DKFTLLKAGL 660
  661 FDALFVRLIC MFDSSINSII CLNGQVMRRD AIQNGANARF LVDSTFNFAE RMNSMNLTDA 720
  721 EIGLFCAIVL ITPDRPGLRN LELIEKMYSR LKGCLQYIVA QNRPDQPEFL AKLLETMPDL 780
  781 RTLSTLHTEK LVVFRTEHKE LLRQQMWSME DGNNSDGQQN KSPSGSWADA MDVEAAKSPL 840
  841 GSVSSTESAD LDYGSPSSSQ PQGVSLPSPP QQQPSALASS APLLAATLSG GCPLRNRANS 900
  901 GSSGDSGAAE MDIVGSHAHL TQNGLTITPI VRHQQQQQQQ QQIGILNNAH SRNLNGGHAM 960
  961 CQQQQQHPQL HHHLTAGAAR YRKLDSPTDS GIESGNEKNE CKAVSSGGSS SCSSPRSSVD1020
 1021 DALDCSDAAA NHNQVVQHPQ LSVVSVSPVR SPQPSTSSHL KRQIVEDMPV LKRVLQAPPL1080
 1081 YDTNSLMDEA YKPHKKFRAL RHREFETAEA DASSSTSGSN SLSAGSPRQS PVPNSVATPP1140
 1141 PSAASAAAGN PAQSQLHMHL TRSSPKASMA SSHSVLAKSL MAEPRMTPEQ MKRSDIIQNY1200
 1201 LKRENSTAAS STTNGVGNRS PSSSSTPPPS AVQNQQRWGS SSVITTTCQQ RQQSVSPHSN1260
 1261 GSSSSSSSSS SSSSSSSSTS SNCSSSSASS CQYFQSPHST SNGTSAPASS SSGSNSATPL1320
 1321 LELQVDIADS AQPLNLSKKS PTPPPSKLHA LVAAANAVQR YPTLSADVTV TASNGGPPSA1380
 1381 AASPAPSSSP PASVGSPNPG LSAAVHKVML EA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle