YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Msi-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDVEFQNVQ EIRGTPQNAM RMIRLELDEE ENRRQMSSSK YGGVCFHVAI AVMLCVMVLV  60
   61 LICSAPLGEN MSNLTSEERH ARLRQIYIEK ERRQRLGSRM GLSPLEEEAN DRLMAIRQVD 120
  121 EEFYNLWRNY HSQPPPFLKH LNIIDTNLYA ALKSMPKGGL LHVHDSGMLR MEILIDLIYR 180
  181 DNLWVCVNLE QDFEDFRFSR YFPHIPPAED YQCNWMLMSN FFQLESRLEF ENRLRKTLTV 240
  241 RPEGYKSSSE LARHLRRHQR IIHGLITFRP IWSEFIFTML SDFYADGVHY VELRSSLPNM 300
  301 YDLDGNNFTI LETAEALVSV SNIFKNSFKD FIGIKLIYAP SRNLNDSRMD EYLENARLLK 360
  361 LHFPNFFAGF DLNTFGDECN LPLLENVTQL LRIGKNIDFY FHAGESRCPD SSRPDANLLE 420
  421 ALLLQSKRIG NAVNLPFHPE IMKVMKRLSI AVEICPLSNH YLQYFNDFRQ HPAAYLIAAG 480
  481 FPIVIGSDYP CFWNSAPLTD DFYVAFVGVI SGWGDLRLLK QFALNSFLFS SLSETEKNMA 540
  541 VSKWQCSWNR WVRNLVNSSG Y

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle