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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0301170, Cad...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPLLLPLFL SLTAGQLVNQ PPQFVPGTGD MSRFSLSENT PVGSPVFQLK GTDPEGGRLK  60
   61 YSISGPVFSV DRETGVVRLR QELDRETQDT VEVIISITDE GIYGTEPNTV SQRRVIPVRD 120
  121 YNDNQPTFLG RPYTASVSES LPVGSELSVE PPIVVVDRDE GINSEVQMKC LEENDICDIF 180
  181 EVRAVKISDG NYTARVALKQ QLDFESRPSY ILTISASDSA LDNRLSSLAT ISINVIDIQD 240
  241 QPPIFTNAPY SATVPENTPA GVSILTVKAV DGDVGIPREI FLSLEDEPFG HFELVPFGDP 300
  301 RDGTAVLQTT SEPLDRENAE ILQNGGVYVF SIRATELIDG AIPAEHSLTR VTIVVTDVDD 360
  361 HQPTFSGPHF NVSITENLAN GMPLPGLSIF VDDRDMGENS RYELSLRDVF NAARVFEVSP 420
  421 TESQGRTPVV VKVLNASRLD YDVVDPDLRK FEFDLVASVK GVEKAKTRVE IHLLDANDNA 480
  481 PVFDQGTYRF TAAENLPVDA IIGHVKATDL DSGEFGHVRY VLKGFGADNF YVNPETGGVY 540
  541 LLKPLDYEKQ SSYSLTVVAI DGGQREANAN LFVGVTDVND NHPNFESKEY SRTIREGAAL 600
  601 FEPQFFVRAH DADGPSQGNG RVKYSIVSEN SIAGNVFRIE PDTGEIVIQK AARSMDTERG 660
  661 EYELVVSATD FGIPPLSNTT RVLVRVGISG NQRPIFRGHF QNMENLPIIG PPSYRVSIPE 720
  721 NAAAGSNVTS VSAHDPDGLD SLLRYRIVGA NDNFEIDEIS GLITVSPQAR IDRDSNMNSF 780
  781 EIIVNAVDSG TPIPETATTT VYVNVKDIND ERPKFEQNSY ATYVSERTAV GESVLRVKAI 840
  841 DKDLNSKLEY SMVGPVAATT KAGVSIANRS NYRLQEAFRV DSQSGEIFVN GTLRHDVAAI 900
  901 IIFTVGVRDL NAEVDPEGQV DTTEVTVYVQ SFQDTNPVFK NTGWTSSRPV IDVKIKEEMP 960
  961 IDSALFILQA EDPVTRQPIT SFELIEPKQV DYFQVAERTG EVILKKRLDY EALGDTGPEF1020
 1021 ELQVRANSAD RQRSTVSRVN ITVENVNDNS PRFERNSYQA TIIENRPHPE RVIRVRALDK1080
 1081 DAVLNARDER LGYHKIIYSL QGEHAMLFDI NNTTGEIIVA SGQTIDRERT PRIQLQIKAE1140
 1141 DSPGRPTDAK QSVVELQIEV LDVNDNAPEF TQKKYSTVIP ENAQIDSFVL QLEAVDADEG1200
 1201 LGGEVRYELV NEGEANGLFK IDTKSGLIST RRNLTGKGRA HPYVLIVRAQ DNGNQMPKQP1260
 1261 TLSTDTDVRI YIGDVSANDG VPYFLSPRVG QMANVTENAV TGAPVFQVIA SDPDDESTPS1320
 1321 GTITYRILPD TPDAEAFVID AHSGLITTRQ SMDRETKDMY RILLEVSDNG QPKQSATRIL1380
 1381 QIAILDVDDH EPRFAREADA GPLSMSVREE EPAGTIVGNF SALDEDLGEN AAIDYVIIDG1440
 1441 NNEQLFTIER NNESLAILKT KKPIDREQVE SFTLTIKCLK LGEPGYKFIG DPYDRQDLSH1500
 1501 LRINVRVLDI DDNLPKFEQP DPTVGIRINV PIDTVVTTLK ASDADAEAPP VGLSIENVTF1560
 1561 VPQFYKRSRS LAVGNLHNLF TLNNRTGELR TGGSFADYVD GYFLMRVMAN NSVQPKRQAH1620
 1621 SNLKVFVIRD KSLLKFVFAR PPNEIQHNIR PFQEQLQKKL KPLGLELHVL DTQVFTRPDM1680
 1681 SLDFTATSSC FQMFKNGAAL SFNEMQKLMN SQQLRQELID IYAAYGVSEV ESCSVRRTHA1740
 1741 AAIFAGMLTS AGAWLVFLAA LIGLAALVSL CTACCLKKKL KRHSKRSLQA SLRTPTEHTA1800
 1801 TSYSYSMPAV LYSEPIYGPL 

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