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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Exn-PA, Exn-PC, ...
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSALNRSNGQ RLSCSGSLSS SGHPADPVTL PRKRRPRARG EVGVTCQGSS TVYLNGPVSA  60
   61 EPIRPAPEPI YQNEAAAISQ RCSYSHQRAQ LLTSMRVTVA EGAENDAKVT MEVSTFVDDS 120
  121 DHYYETLSPL GNKRHSTQLV RQSQDGNRSG GVRSSHRRSK NHSASAHTLG EHVVISDDYD 180
  181 SFETDSDDHG DGEPDLRQRN YNDSGVDMRN HRLPKPPPPQ NQVYEFVRKF KDFISSKKSP 240
  241 KGSQQKLYEN TPASTLFYVE CSKRTEDVYE NTDFGPERIP APETKGPVHQ EQAPVLRAKQ 300
  301 KNGKSLRSRL RKSLVGSSFD TKQLSSLAPT RSTFYVEDPE GSLPALPLEP EIHGSGELDS 360
  361 GFSDKNCTPL PETPKFSTVA RKAKKEAKAN RRRTTIGLRP NDPPPPPPPM TGNKSPLDPE 420
  421 RELDAEQTTS WYAECGVFKQ ATNGAVSPRG DEPVTPTPSG HGGVSSWYAE SGLYQTSGIS 480
  481 VASSSGSSGV STGNEAGLGD ELSSEPHSLF SNEPLYQMYS AAKLESITRD LEAHGSSDGY 540
  541 EEIGLQAKAK PEPLVKPRPT ALQLVEPKNG PSRTLWSEIP EVIHSCILPT LTSRERSLQE 600
  601 AKFEIITSEA SYLKSLNLLR RHFMNHNAFL DSSVLSAKDR KALFSYIVPV HECSERLLTE 660
  661 LEACWQDNIM LLGLSRCIYE IAERHFHVYV AFCEHQGRMD RTLRRLKESK ESLAFQQHLE 720
  721 RLEASPSCCG LNLHSFLMLP MQRITRLPLL IDAVFSKESP LNREEYESWK LTLALVQKVV 780
  781 GQCNEAANRW EQAFELERIA RQLEFPSHVR ALAIAPVGVP RAGAKPRFLV KRGELTHLLW 840
  841 RGEDAKLTFG KRLTKISIYA FLFSDLLLLC KRRGESCFSV FDYCPRSMLT LAAGDSLPQL 900
  901 PTKDLKDQAG KNLILMTLLE NCDRKTVELV LSCPSVSDQQ RWLQAMRPPE AETPGEKLYE 960
  961 SWDCPQVVAK HSYESDEPDV LQLELGDVVN VSRKLPDGWY QGERIRDGAV GWFPGSYTEE1020
 1021 LNSAHVRARN LKQRHRLLTF TATYLESQKS K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle