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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Nc73EF-PH, Nc73EF-PF
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHRAHTAFSL ALSPMAHKNF ATWLLKSSSS QQMAKVTAAA AVRTYNSAAA EPFANGSTAS  60
   61 YVEEMYNAWL RDPTSVHTSW DAYFRSNSYV SPPNLAPVQA NTLPLTAFNF GGAVAGAAPD 120
  121 SKTIDDHLAV QAIIRSYQSR GHLASDLDPL GILTREKTVC KDGLARRANE DVLRQHSGFL 180
  181 FGEQDMDRQF KLPSTTFIGG DEASLPLKEI LNRLENVYCN KIGVEFMFIN SLEQCNWIRK 240
  241 RFETPGVLNF SPEEKRLILA RLTRATGFEA FLAKKYSSEK RFGLEGCEIM IPALKEIIDV 300
  301 STELGVESVI MGMPHRGRLN TLANVCRKPL NQIFTQFAGL EAADDGSGDV KYHLGTYIER 360
  361 LNRVTNKNIR LAVVANPSHL EAVDPVVQGK TRAEQFYRGD QEGKKVMSIL IHGDAAFCGQ 420
  421 GVVYETMHLS DLPDYTTHGT IHVVANNQIG FTTDPRFSRS SPYCTDVARV VNAPIFHVNA 480
  481 DDPEAVMHVC KVAAEWRATF HKDCVIDLVG YRRNGHNEID EPMFTQPLMY QKIRKHKNCL 540
  541 DLYADKLIAE GTVTAEEVKS VAAKYENICE EAFALAKTET HVKYKDWLDS PWSGFFEGKD 600
  601 PLKVAPTGVK EETLIHIGNR FSSPPPNAAE FVIHKGLLRV LAARKAMVDE KVADWALGEA 660
  661 MAFGSLLKEG IHVRLSGQDV ERGTFSHRHH VLHHQLVDKA TYNSLQHMYP DQAPYSVSNS 720
  721 SLSEYAVLGF EHGYSMTNPN ALVLWEAQFG DFSNTAQSII DQFISSGQSK WVRQSGLVML 780
  781 LPHGMEGMGP EHSSCRVERF LQMSSDDPDY FPPESDEFGV RQLHDINWIV ANCSTPANYY 840
  841 HILRRQIALP FRKPLILCTP KSLLRHPEAK SPFSEMSEGS EFQRIIPDNG PAGQNPSNVK 900
  901 KVVFCSGRVY YDLTKTRREK QLEGEIAIVR VEQISPFPFD LVKEQANLYK NAELVWAQEE 960
  961 HKNQGSWTYV QPRFLTALNH SRDVSYVGRA CGASTATGSK AQHIRELNAL LNDAIST

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle