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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Nc73EF-PG, Nc73E...
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHRAHTAFSL ALSPMAHKNF ATWLLKSSSS QQMAKVTAAA AVRTYNSAAA EPFANGSTAS  60
   61 YVEEMYNAWL RDPTSVHTSW DAYFRSNSYV SPPNLAPVQA NTLPLTAFNF GGAVAGAAPD 120
  121 SKTIDDHLAV QAIIRSYQIR GHNIAHLDPL EINTPELPGN SSTKSIYANF SFGEQDMDRQ 180
  181 FKLPSTTFIG GDEASLPLKE ILNRLENVYC NKIGVEFMFI NSLEQCNWIR KRFETPGVLN 240
  241 FSPEEKRLIL ARLTRATGFE AFLAKKYSSE KRFGLEGCEI MIPALKEIID VSTELGVESV 300
  301 IMGMPHRGRL NTLANVCRKP LNQIFTQFAG LEAADDGSGD VKYHLGTYIE RLNRVTNKNI 360
  361 RLAVVANPSH LEAVDPVVQG KTRAEQFYRG DQEGKKVMSI LIHGDAAFCG QGVVYETMHL 420
  421 SDLPDYTTHG TIHVVANNQI GFTTDPRFSR SSPYCTDVAR VVNAPIFHVN ADDPEAVMHV 480
  481 CKVAAEWRAT FHKDCVIDLV GYRRNGHNEI DEPMFTQPLM YQKIRKHKNC LDLYADKLIA 540
  541 EGTVTAEEVK SVAAKYENIC EEAFALAKTE THVKYKDWLD SPWSGFFEGK DPLKVAPTGV 600
  601 KEETLIHIGN RFSSPPPNAA EFVIHKGLLR VLAARKAMVD EKVADWALGE AMAFGSLLKE 660
  661 GIHVRLSGQD VERGTFSHRH HVLHHQLVDK ATYNSLQHMY PDQAPYSVSN SSLSEYAVLG 720
  721 FEHGYSMTNP NALVLWEAQF GDFSNTAQSI IDQFISSGQS KWVRQSGLVM LLPHGMEGMG 780
  781 PEHSSCRVER FLQMSSDDPD YFPPESDEFG VRQLHDINWI VANCSTPANY YHILRRQIAL 840
  841 PFRKPLILCT PKSLLRHPEA KSPFSEMSEG SEFQRIIPDN GPAGQNPSNV KKVVFCSGRV 900
  901 YYDLTKTRRE KQLEGEIAIV RVEQISPFPF DLVKEQANLY KNAELVWAQE EHKNQGSWTY 960
  961 VQPRFLTALN HSRDVSYVGR ACGASTATGS KAQHIRELNA LLNDAIST

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle