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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|45553075, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLLCCCCCS NMAPNQRVTR KWELFAGRNK FYCDGLLMSA PHTGVFYLTC ILITGTSALF  60
   61 FAFDCPFLAD SINPAIPIVG AVLYFFTMSS LLRTTFTDPG VIPRASNDEA AYIEKQIEVP 120
  121 NSLNSPTYRP PPRTKEVLVK GQTVKLKYCF TCKIFRPPRA SHCSLCDNCV DRFDHHCPWV 180
  181 GNCVGKRNYR FFYLFLVSLA FLAVFIFSCS VTHLKEHEVF NVIKAAPFTV IVVFICFFSI 240
  241 WSVIGLAGFH TYLTTSDQTT NEDLKGSFSS KGGPRTQNPY SRGNICLNCC HILCGPMTPS 300
  301 LIDRRGIATD EFIQQMQHQS SPRHALSDVL SASHMVTTSQ PMMGGLGGGG IGGAGGGISI 360
  361 GGAELKPRFY DESNPSSSTL EGNGGAINGH GNGHGNGFDH PPPSYDLVQN GKSRKHHQQR 420
  421 CSLQTLLPAS AQQQFKASKH KHKQLKQHLV AAELQQHEGG PGPGPNSPSL LRSPATSSSY 480
  481 RLNLKRSLHL PLTPSYDDVR HSPLPLLHHH VHAQQTTAIG TVAAAAAAVA SGASGTNTGT 540
  541 GTGTGGSSSS ATTTAPTSVS VSLATAPPPL APRRPSTLQL QASGAISASN STLTTIHTTA 600
  601 PQAPAPTDFK YYSPQRSTDS NLMRNYPFPK AARGMRRQST MSVDSQKVNI AGYQPLPMRK 660
  661 PYKHQEVMFE LKSPTNRLTI RECDFGGGGE PCDDDQSIKD SQIFRVSKRN LYMNHRSPWK 720
  721 ERDRYSNLYE YSFNIDLNSI IEDAAGSDSS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle