YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ZnT63C-PB, ZnT63...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKYSGKKCR LLSMMWLTAF FFFVEIIVGY VTNSMALVAD SFHMLGDIAA LVISFLSVKM  60
   61 SPKKWSKNTF GWARAEVLGA LVNAVFLVAL CFSITIEACK RFIEEEPIHE PELLVIVGAL 120
  121 GLLVNVIGLC LLYEHGGHHG HSHGGGLTRN HSRLTELANM DEGEDEQNDF AYEKQKEKAP 180
  181 VKKSSHGHSH DPGQMNMRGA FLHVLSDALG SIIVVISAVV VWKTEWKYRY YMDPALSIVL 240
  241 VVLILHSVWP LLRESALILL QTVPTHIQVD AIQKRLLEKV DGVLAVHEFH VWQLAGDRII 300
  301 ASAHIRCRNL SEYMKIAEKV KEFFHNEGIH STTIQPEFSE IEGCNMSDGT SSINISGSDC 360
  361 CALDCPTTEE GCVKATCCQN NNKLNQLPSP TNSPYLCRQR NAARQAGDVE AGSLLEATSS 420
  421 GNQGATGGAS TGAPVAAIGA TSTPKSDLV

Type	Start	End	Confidence
Cytoplasmic	1	11	0.93
Transmembrane Helix	12	32	0.89
Non-Cytoplasmic	33	74	0.57
Transmembrane Helix	75	96	0.85
Cytoplasmic	97	112	0.55
Transmembrane Helix	113	135	0.90
Non-Cytoplasmic	136	199	0.61
Transmembrane Helix	200	222	0.91
Cytoplasmic	223	229	0.58
Transmembrane Helix	230	252	0.87
Non-Cytoplasmic	253	449	0.63