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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24655928, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPAYSKNVV DYRSLGNMPG YEWKLLRYKC RELRLEGVYH RHCHLVSVAL VTQLIIVIEI  60
   61 LMLIHVILLF SVVKGAQRRA IRIHCHIGQL FNGSAFDCDG FVISATLVSK VHTKISSISD 120
  121 LILPICYFRP FSLVPSYDHV VIVLIYLMFP IAFVKNGRAY FLGLAVSLFY FGYMALIDKI 180
  181 STLDKVWELT AYGAYLFFLN MLCMFLSRFQ EYNMRSGILS RYQVVYQNLV FQMAMKEEKA 240
  241 LLDSIIPVTL ARSLQDAIAS HIEEDPSNLM PFTKTRHLFM EPHPEVSILE ADMVDFTGLT 300
  301 TTMEVSDLVA ILHELFVSFD LAANHNRATR IKFLGDSYTC VTGIPSYFPT HANACVNQAL 360
  361 DMIEISREVS KRRNKKIDLR IGVHSGEILA GIIGLTKWQF DIWSKDVDIT NRLESSGLPG 420
  421 MVHISSRTLG LLDNHYVYEE GTDTAKLDPL LQRSNLSTYL IRSRLPNFED TDDLEDDNFS 480
  481 LNDYRFSFSF SQDYEDIQVK AQRDMILEVE HMPVNRVQTC KIRRPMHRIA KEDINEEYRF 540
  541 HLESYYLFTT FRSWRMEWSF NKMRDLLMKY SLGMMVFAGA TIIAMDLLVK SEAMDYTMLF 600
  601 SLFLLILLPL LLASYKKLWL RGRRLSPITQ PTFFLSRWFI KASDLIEKSV FVRIPLAIMV 660
  661 LFLLYVMSSE TVGVTYAVVI VLSLMLVIIG IPLIIKLGVG LAILGSHVIT VHAYYGFAFE 720
  721 RSQTTNIGVT SSLAHSWYMV AFFIVVVVRE GYLNYILKAS YFMSMCFEKK HELTKVKTRT 780
  781 IKIIMANILP THVAEVFKVR RRSDQLYYEN FSQVAVMFAT IENYEADKSG LRALHEMICY 840
  841 FDELLVNYQS WYKIEKIKVM GWTYLAACGL HVDHYTDFSV SVPISTNRES DKLQKSGSVR 900
  901 FAPMDGDEIM IKDLHPTQAT TNEDDNTILV MTEFALNLLR ILRDIRSKGI FFEKDSKLTG 960
  961 SLKIGIAHGP VMAGVVGLSK PHYDIWGHTV NMASRMTSTG VRDGIHVTES TANVLRDFNI1020
 1021 RCTYRGMTFV KGVGQVPTYL VDLDENLHFQ QHSPDNDSHK GSIVSVHWLD EKRAER

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle