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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: p130CAS-PG
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDKTTSSSV SVSTSCCSSN AINADLDYDV PVSRRILIKS KLYAKAIYDN YADTSDELPF  60
   61 KKGDILTVLE QDTEGFQGWW LCSLRNRQGL CPGNRLRVLN SYDSGCFSPS PASSPVPSLA 120
  121 ASTATLDSSI CSAEIYENGS VISAVSSSNS NSGGASSGLG SESVSRVSRR SWHASPTKVI 180
  181 TPQRHGDVYI YNYSPGSATG SGARAAPSTP QQQIYSNQSI YQNFAMMSSP RQNASGSEFE 240
  241 TYDIPKPATP VPLNYDSPRS GLPKASNSTT TSSSSLGTRF ETLKSVAASI AEESYDVPRP 300
  301 LILGSNQLQQ QMSQMTPSSS ASSLLTSDSL SLSFSSSNRS SLANMPDYDI PRRNPLPVRR 360
  361 QQSGLTYDFP LPPLQEQVPR VLCTPSTVTT TKELPLELSS ALETLAKLQL QTTAAINRLL 420
  421 SFVVPNWRTR AQLEPAIMDL KLAALRLRTT LHDLAEFGEG ALGNATRSED RNLALKLRPL 480
  481 VRALRDANKL IHDSSESLDA QGAWSIDQLA RSDEKHGCRP PDALDQLMVC AQTLTEDVRS 540
  541 TTSFIQGNAS LLFKRQLTVG HNGGSGTGVL EGSRGSAEWL EDYDYVAFES KDAAARKNEA 600
  601 LREAIPADLK TQFDTVIRTA ESSAMGAGSG SIPTTPTART TPTTPCKSPE MTDKDKKLVR 660
  661 YYAQQISTHM GNLMQAIDSF LETVEKNQPP KFFIAYGKFV VVSAHNLVTI GDNVYRNISK 720
  721 EALREKILRC TNALSDALKT CVLKSKKAAA HFPSGSAVQE MVDSVVHINN LARDLKSVML 780
  781 QAVHLSTAAG VGA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle