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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0311729, uzip-PA
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.84
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSNSCLISL GLLLVLIQIL APAKAAEHSV FTHKNASSVL GQLVTSSTLV WESYDPKDAT  60
   61 QLQFAVEGGK YVTEDEHYPM YVCRVPIDGI QVSGHTEKIL QRHVCLAAHY KHGKYDNFDV 120
  121 LMNKGHLGKV GWRHWRKFDA GVPVGAIRIG DDSYIGRHRA PSQPNKDGVV THWGADFNLG 180
  181 HLEPVGLGKI RVIEAEREKY YDDGEVLVET EPFRYELRDI KLDRLRTDIQ ENMTELVTRK 240
  241 LENLEDKYST VETILSYTFN YNQYWGSHEG VARGLPTKIF EKDEAVPAEI NWALKHTEKR 300
  301 SENKAVHTKL WPGTAINVTL RGNYVTLEAP YSGKLFAFYY GSDESVSRKI SAEVRKSYLK 360
  361 EVKLEFSPVY WIENGTLVPT TTTTTTTSTS TTTHATTTST NEPTPINEPP LVHMKDNGVQ 420
  421 HSGPDTLEKT LHDSPSSNEL NSHEAPENMS SDPGKDVALA GFGVNAAGST FIAGSALLTL 480
  481 LLTIFLSL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle