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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG3829-PA, FBpp0...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHTKDAEMS MPARQESDRT SAPSVTKSLT LNSTRSGVGT GNFGGYGMTN GAEKPSVLHM  60
   61 IMEALGLRNQ AQNREPTSKD IGTLIMLGVM FLLFVISVTG FFVMWFTEYY NNTILENLIL 120
  121 AENSDTANSW LNPDPKYDTL LKAHIFHYPN IDDYLAGRAD KIKVVDVGPL TYQEHTVKDE 180
  181 VSFNKNFTVS FRDRKSYKFL PEKSSIGEHE VVRVPNVPLI SAAGPVKRMK AFERLAVSTW 240
  241 IKQFKEPLFK NLTVSEYLWG YEDSIIKLKS LGRGRRRFGL LMSRNGTSVD SVQLNTGEDD 300
  301 ITKFSIITQF NGMPQLDYWE GDECNRIDGS EPSMFSPHLL QDRSTVNVFL QVLCRKVPLH 360
  361 FEKEVTIYND IDVLRYRTPM DVFSHPSKNP ANQCYCQNTE LCLPSGVINA TKCYGDAPIF 420
  421 PSFPHFFTGD PVLYQDFEGI EPDAAVHQTY ADIHPRFGFP ISGASRVQIN IMLDKTPILR 480
  481 NQGDRLKNTT ILPLMWIEIT SGDFSEEVLH TLYLSTFGLN AIQQTLKYGT LLISVTSFSL 540
  541 IVAGVYYLNS RREQQLQESK TSAELEALNG GENVIVVHHI DMPVPLPVQD GGIHQGT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle