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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Atf-2-PA
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTAGDMDHL ASVSFGDFET KSPEGDVSCY QNFRAQTEHV SLDISLGQKS DTLFAADQTP  60
   61 TPTRLIKNCD EVGLFEDLQH VNPFDIGFQQ AAERNVSGTP SRPEARPNDG ESLHTPQVYP 120
  121 VEAPTVVSVP SENQVPQSVS CGDMDVDQLL ATTVTSPSKA SQDGPPPLQL IQPQVLTWVL 180
  181 PAQSVPISIA TVDCNRNRVK PTGAIHPFIL PKPTAKELNK TSKRPEPILV SCNPPNNEPS 240
  241 SASLTPTSQL PIKERLKAII HSNNNRRSFS TPPKAAKAKD RSRDEDCMER RRAAASRYRN 300
  301 KMRNEHKDLI KQNAQLQQEN QELHERISRL EKELQQHRSH SSLAGGLRRR PIQPPVMDPQ 360
  361 SEQEYAFLAQ MMEQYARRRL QQQFDQQLHE INLKMDRQRQ LLEQERYRQR QQELQVQREA 420
  421 EEDYESNGNN LNQQYDQYDN AEAEASYGSP MEAVSDLQSP PLYLPRLPNL PPLPSLPNRP 480
  481 SLGNSPNRNS VLRERIPFAV GPSDARFFDN PNDPSGELDS RALEDYEEYA PIEPTTEVAT 540
  541 TASKTKIDTP VPAPVPVEPP KLLDAANTNF HRINPQSAAA AAVAGVNIPQ SKEQPPHELN 600
  601 ALINKLQKQS KAPSHLTLVN GGDSSQEQIV LRQHLGMNSE MGVYIVALIA GVSAAVTVGL 660
  661 LALGVTWFHN RHKAAADVEY PAYGVTGPNK DVSPSGDRKL AQSAQMYHYQ HQKQQIIAME 720
  721 NQATDGSCGM SDVESDDDNE EGDYTVYECP GLAPTGEMEV KNPLFLDETP ATPSNNLSSQ 780
  781 TAGAANAAAA TNNNITQATP QQPATLKKGT VKPNINLLNA TGTAAAAASA ASAASATGGE 840
  841 EPKQKRKSKK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle