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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG3499-PB
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSTTTHSVP YLYLGNFSRK PHYYSVNRTK LHGSAGAARL SKSTSTSSRS HDLVLDLRNL  60
   61 LSRSSASIQG MVERAARLNG ILDRRLVDDV LAKVTSMLPS MRDVRVTLEE SATQIGRVQL 120
  121 QNYQFEVSLT GAAGSVPTGA NVKVIPTITP GLLRPLFSQQ QLNQIRGFKT DRSIEAEQKR 180
  181 NPTMTSRLKN ALANSPQRLD GDTPLQAEKL RRLLAKSEEH GFNKAESLKI AFAEGYLAAA 240
  241 NSEDSPKSGK TMKYLKTIVV IVVFLGIFLS FFTTSNGSVF RIQLGNQVEV DPEEINVTFE 300
  301 DVKGCDEAKQ ELKEVVEFLK SPEKFSNLGG KLPKGVLLVG PPGTGKTLLA RAVAGEAKVP 360
  361 FFHAAGPEFD EVLVGQGARR VRDLFKAAKA RAPCVIFIDE IDSVGAKRTN SVLHPYANQT 420
  421 INQLLSEMDG FHQNAGVIVL GATNRRDDLD QALLRPGRFD VEVMVSTPDF TGRKEILSLY 480
  481 LTKILHDEID LDMLARGTSG FTGADLENMI NQAALRAAID GAETVSMKHL ETARDKVLMG 540
  541 PERKARLPDE EANTITAYHE GGHAIVAFYT KESHPLHKVT IMPRGPSLGH TAYIPEKERY 600
  601 HVTKAQLLAM MDTMMGGRAA EELVFGTDKI TSGASSDLKQ ATSIATHMVR DWGMSDKVGL 660
  661 RTIEASKGLG TGDTLGPNTI EAVDAEIKRI LSDSYERAKA ILRKHTREHK ALAEALLKYE 720
  721 TLDADDIKAI LNESQT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle