YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0309871, CG9...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	18	0.89
Transmembrane Helix	19	42	0.84
Non-Cytoplasmic	43	63	0.92
Transmembrane Helix	64	84	0.90
Cytoplasmic	85	90	0.88
Transmembrane Helix	91	112	0.93
Non-Cytoplasmic	113	121	0.70
Transmembrane Helix	122	143	0.86
Cytoplasmic	144	153	0.90
Transmembrane Helix	154	176	0.89
Non-Cytoplasmic	177	183	0.77
Transmembrane Helix	184	204	0.94
Cytoplasmic	205	242	0.95
Transmembrane Helix	243	264	0.85
Non-Cytoplasmic	265	286	0.88
Transmembrane Helix	287	308	0.87
Cytoplasmic	309	324	0.85
Transmembrane Helix	325	344	0.95
Non-Cytoplasmic	345	350	0.87
Transmembrane Helix	351	372	0.87
Cytoplasmic	373	381	0.75
Transmembrane Helix	382	404	0.87
Non-Cytoplasmic	405	416	0.78
Transmembrane Helix	417	439	0.90
Cytoplasmic	440	495	0.89

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTHKPCKGPR LGVRHLQSFL LFLGLTVMHI ARLNVSVAIV AMTNAATTNP NFPEFEWTEK  60
   61 QKSYILSSFY WGYILTLFPG SFLCRRYGAK VVLFVASCGT AVLSLMTPWC ITWGGWQVFC 120
  121 AIRILQGLFQ GVIFPCVTEH LAMWSPPEER NRLGAFSYTG TDCGTVLAMF ISGMIAKGAM 180
  181 GWPGISYVSG SLCAAWCFLW LIFASNNATE SRFVGEAECK YIESSLEHNE DFHGRTIPIP 240
  241 WRAIWTSVPF LALLVTRCAE TYGLSTLQAE IPSYMNGVLN MEIQSNAVFS SLPFLAMWLL 300
  301 SYVYLIAADV LLKKKILSLT AVRKLFNTLS FWIPAAALIG IGFLSEENKN LAIVLMTVSV 360
  361 GVNSGATIGS SLNSIDLSPN HAGILIGLSN TVANVIPILT PLIAGEIVAD KHNRGQWQIV 420
  421 FGLAAVIFFV GNVVFIIWGT AKAQPWDADD FLKPKDTESA CEKPKITPAE VAPPIDPVLE 480
  481 QQISWPERYT VKAIE