YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|220943670, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKSNLVISC LLLVAISNSL VRAQDLKVEV ISTPEVCEQK SKNGDSLTMH YTGTLQADGK  60
   61 KFDSSFDRDQ PFTFQLGAGQ VIKGWDQGLL NMCVGEKRKL TIPPQLGYGD QGAGNVIPPK 120
  121 ATLLFDVELI NIGNAPPTTN VFKEIDDNAD KQLSREEVSE YLKKQMTAVE GQDSEELKNM 180
  181 LAENDKLVEE IFQHEDKDKN GFISHDEFSG PKHDEL

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	216	0.99