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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7302344, gi|2...
Protein type: Transmembrane
Type Confidence: 0.85
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLLLCTLAA ANDLKDLLED STTSSSTSTT SSTIPSSVTS PTTPTAYVVS AAAVPALVAG  60
   61 RGKSKSTSGK YVNKSSPRKR KAEQVSSLPL PVDDALMEWK CPNITGTRNA ELECGCDLPH 120
  121 TLRCNIDLHG MMLLADRLRT SPYSISLLDC SLRNVTFLSD AKIFDNVSLH GLVISSGEIK 180
  181 RVHKSAFLGI RGPLQALGLP GNALMSVPWN ALSTLSALER LDLANNKIKA LGTADFVGLT 240
  241 SLVYLELSNN QISSISQRTF VNLRKLEVLK LGGNRLGDYA QSLRSLSQCL SLRQLDLQAN 300
  301 NLNGPLSEQT LPGMRNLESL NLNRNLIKSI QNKALANFSR LVSLSLRHNQ IDVLQDHAFF 360
  361 GLGALDSLDL SYNGIVAISS ASLQHLSRLT VLDLTHNFLR ALTSDLIAPL PSLRELRLAG 420
  421 NDISIVARNA MDGARELESL QMQENPLSCD CSIRPFAEWL QESQLHSSLS ASCVTPPRLE 480
  481 GAPLLQVPVE TLSCDMDNVE KDNANIMQHL ETLAKPNQTS PIKDLSEEII LHELHFSTDY 540
  541 GLILTWLLNL SKKDYMCDAI FVYKEEHINE ILIDNSPIHC ESKVVNGQNT VSVIVPDSSS 600
  601 LEIGESYRFC LVMIQEQKPD SELNIGCSNI TRLERSSPGA VPVSRQYQRR PYYNANELKP 660
  661 EVVHDAGEDY QVNQRRFNSV VGSQPQQTQQ STLLHSYTVI DSLNKSFLPG LGLGVLVTSV 720
  721 LVLIWGATRI RQTGGSSGGG GRNGDSIDSN SSSMHNNNNN SRPGTPTATT CYAASDHIAR 780
  781 LADAENGTRY LKLQATTSL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle