YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG15096-PB
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	20	0.83
Transmembrane Helix	21	42	0.76
Non-Cytoplasmic	43	68	0.69
Transmembrane Helix	69	87	0.70
Cytoplasmic	88	96	0.63
Transmembrane Helix	97	117	0.88
Non-Cytoplasmic	118	124	0.53
Transmembrane Helix	125	147	0.62
Cytoplasmic	148	162	0.74
Transmembrane Helix	163	183	0.84
Non-Cytoplasmic	184	190	0.71
Transmembrane Helix	191	210	0.95
Cytoplasmic	211	250	0.93
Transmembrane Helix	251	270	0.91
Non-Cytoplasmic	271	296	0.90
Transmembrane Helix	297	319	0.84
Cytoplasmic	320	334	0.85
Transmembrane Helix	335	354	0.95
Non-Cytoplasmic	355	360	0.87
Transmembrane Helix	361	380	0.91
Cytoplasmic	381	390	0.78
Transmembrane Helix	391	417	0.83
Non-Cytoplasmic	418	428	0.76
Transmembrane Helix	429	448	0.95
Cytoplasmic	449	475	0.89

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTTVKNRRF EDEDSGLGVR HFQVLLLFFA LTVAYGCRVN LSVAVVAMTD AASVNPDFPE  60
   61 YNWSEKTKSL LLSSFFWGYV ITQVPAGQLA RKYGGKVMIL SGLAICSILN ILTPICAKIG 120
  121 GWQLVCALRV VEGLCQGVVF PSTHTILSQW APPKERATLG TCAYSGNQFG TILMLATSGV 180
  181 IAASPIGWPS IFYISGGIGC VWSVVYFFFG AGSPQECKSI SAEEKKLIEM SQADEVSGGQ 240
  241 EQPKEQLPTP WLSFFTSPAF LVLIVSHSVH NWGFWTLLTE IPSYMKNILG KDIKSNALLS 300
  301 SLPYVCMFAM SFVFSSISAQ LNNRNCISRS TSRKLFNSIG LWIPMVTLVG LGYVNPDQSE 360
  361 LAVVLLCFTV GMNGATYLGF NTNHIDLSPN FAGILMGITN GVANIMSIIA PLIVGFIVTN 420
  421 EHDPEQWRIV FFIAAGFYLV GNTLYVIFGK ANVQPWNDPP AKPRRNSTPQ VESQH