YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG15094-PB
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Non-Cytoplasmic	1	22	0.47
Transmembrane Helix	23	42	0.62
Cytoplasmic	43	49	0.64
Transmembrane Helix	50	71	0.89
Non-Cytoplasmic	72	78	0.58
Transmembrane Helix	79	100	0.72
Cytoplasmic	101	112	0.87
Transmembrane Helix	113	135	0.90
Non-Cytoplasmic	136	143	0.79
Transmembrane Helix	144	163	0.95
Cytoplasmic	164	204	0.97
Transmembrane Helix	205	223	0.91
Non-Cytoplasmic	224	252	0.85
Transmembrane Helix	253	272	0.94
Cytoplasmic	273	289	0.91
Transmembrane Helix	290	310	0.93
Non-Cytoplasmic	311	317	0.83
Transmembrane Helix	318	338	0.93
Cytoplasmic	339	351	0.78
Transmembrane Helix	352	375	0.87
Non-Cytoplasmic	376	385	0.80
Transmembrane Helix	386	406	0.95
Cytoplasmic	407	443	0.97

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDRNASNPD FPEFDWNEST KSYLLSSFFW GYVVTQIPGG YLSAIYGAKY MLFYGVLICS  60
   61 CLALLTPFCA VNGGWTVVVV LRAVQGLCQG VIFPSTHTFL SKWAPAEERG RLVGYTYSGS 120
  121 QFGTVVMLSV SGYIASSSLG WPSTFYIPGC VGIVWSFVWL YLCSSTPAQH PTITPNERRF 180
  181 IESSGQARRP SDAGREEQPR PPTPWWRIFT SVPFLVLVLA HCANNWGFWT LLTEIPTFMK 240
  241 NVLGMDIKNN GPLSALPYFA MILLTCVFIW LSDTLKQRGT VIPLGFSRKF FNTLGMWLPM 300
  301 LALIGLGYIT EGEANVRLAI GLLTAAVATN SATYLGFHVN HIDLSPNYAG TLMGITNCAA 360
  361 NFMSILAPLI VGLIVWDETN PAQWRIVFFF TAFVYFIGNL LFMLFGRTRV QPWNSRPTTR 420
  421 TPSPGGGGER DEGTEDRGPL IGA