YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0311548, FBp...
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTEKSSSSS FEDLTNAEDT KDIRKVAAEE AASGDGAPPA SVSGDGQKAE EEDAEEECDI  60
   61 LGNKQLIKRT IKKAPQDSFR RPIRGELVTV NFTGKLDNGT VVENELNFQC HVGDYEVIQG 120
  121 LDMVLPMLQV GEVSQVSVDS RFGYGSLGLK KEGESEYLVP PDAHLTYEIE LLDIKYEEFA 180
  181 DLKSFEILRK YGTRKKERAN FFYKRSEFTT AIHLYRRALD FLDNRDGDPD SEFDKEDLEL 240
  241 SNSDTQTLLE DRLIVYNNLA MTQIKIAAYD AALQSVEHVL RCQPNNSKAL YRKGRILEGK 300
  301 ADTQGAIKLL QKVATLEPEN RAVQSDLARL FIKARREEHN EKEMYQKMLG QAKKMEQNTA 360
  361 TRQKQPLVDN SKLKLLGYLM GTILIGVAGV AIYRYKY

Type	Start	End	Confidence
Non-Cytoplasmic	1	374	0.83
Transmembrane Helix	375	395	0.86
Cytoplasmic	396	397	0.70